Roseivirga seohaensis str. SW-152

rod

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Cytophagia

Order

Cytophagales

Family

Roseivirgaceae

Genus

Roseivirga

Description

Roseivirga seohaensis str. SW-152 is a Gram-negative, rod-shaped bacterium. It is characterized by having a single replicon, which is a crucial feature for its genomic structure and replication process. The strain has been sequenced, and its genomic information is available under the accession number LRPB00000000.1. Gram-negative bacteria, such as Roseivirga seohaensis, are known for their unique cell wall structure, which includes an outer membrane containing lipopolysaccharides. This feature often contributes to their environmental adaptability and resistance to certain antibiotics. The rod shape of the organism may also play a role in its motility and ability to colonize various environments. The ecological significance of Roseivirga seohaensis str. SW-152 may be related to its potential roles in marine ecosystems, as members of the genus Roseivirga are commonly found in marine environments. They are often associated with the degradation of organic matter and nutrient cycling. Understanding the traits of this particular strain can provide insights into its ecological interactions and contributions to marine microbial communities. The genomic data available may also facilitate further research into its metabolic pathways and functions, potentially revealing its role in biogeochemical processes in marine habitats.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassCytophagia
OrderCytophagales
FamilyRoseivirgaceae
GenusRoseivirga
SpeciesRoseivirga seohaensis
StrainSW-152

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Roseivirga seohaensis strain SW-152 contig_9, whole genome shotgun

Gene Summary

Adenine Count

1270053 bp

Thymine Count

1255299 bp

Guanine Count

810009 bp

Cytosine Count

824969 bp

Genome Length

4160330 bp

Protein-coding Genes

3614 genes

Non-Coding Genes

43 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
phenylacetic acid degradation bAWW67_01035Not AvailablePositive230517 - 23113423645.6
phenylacetate-coa oxygenaseAWW67_01040Not AvailablePositive231137 - 23189228901.4
hypothetical proteinAWW67_14085Not AvailableNegative231958 - 23247919840.9
elongation factor 4AWW67_14090Not AvailablePositive232554 - 23434166776.2
bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/5,10-methylene-tetrahydrofolate cyclohydrolaseAWW67_14095Not AvailablePositive234352 - 23523331209.1
7-carboxy-7-deazaguanine synthaseAWW67_14100Not AvailablePositive235328 - 23594523248.6
hypothetical proteinAWW67_14105Not AvailablePositive235955 - 23783270795.0
alanine dehydrogenaseAWW67_14110Not AvailablePositive237914 - 23912845862.6
2-deoxyribose-5-phosphate aldolaseAWW67_14115Not AvailablePositive239118 - 23978324024.1
acylphosphataseAWW67_14120Not AvailablePositive239764 - 2400339720.57

Displaying genes 211 – 220 of 3657 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

1 record
Metabolite IDMetabolite nameStructureCAS number
BASm0001865diphosphateHO7P2Chemical structure of diphosphateNot available
Average174.95Da
Monoisotopic174.9213971Da

Displaying 1–1 of 1 metabolites

Health Effects

No health effects information available for this bacterium.