Sphingopyxis sp. FD7

Rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Sphingomonadales

Family

Sphingopyxidaceae

Genus

Sphingopyxis

Description

Sphingopyxis sp. FD7 is a rod-shaped bacterium characterized by its unique genetic composition, possessing two replicons. The organism is cataloged under the accessions NZ_AP017899.1 and NZ_AP017898.1, which provide essential genomic information for further studies and classification. The rod shape of Sphingopyxis sp. FD7 suggests a potential adaptability to various habitats, as this morphology is common among bacteria that thrive in diverse environmental conditions. Furthermore, the presence of two replicons may indicate a complex regulatory network for gene expression and replication, which could enhance its survival and metabolic capabilities. Given its classification within the Sphingopyxis genus, this bacterium may play a role in biogeochemical cycles, particularly in the degradation of organic compounds. Sphingopyxis species are often associated with environments rich in organic matter, where they contribute to nutrient cycling by breaking down complex molecules. In summary, the rod-shaped Sphingopyxis sp. FD7, with its dual replicon structure, embodies traits that may facilitate its ecological role in organic matter decomposition. This positioning within the environment underscores the significance of Sphingopyxis sp. FD7 in microbial communities and its potential contributions to ecosystem functioning.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderSphingomonadales
FamilySphingopyxidaceae
GenusSphingopyxis
SpeciesSphingopyxis sp. FD7
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Sphingopyxis sp. FD7


Gene Summary

Adenine Count

643589 bp

Thymine Count

635144 bp

Guanine Count

1202579 bp

Cytosine Count

1214302 bp

Genome Length

3695614 bp

Protein-coding Genes

3481 genes

Non-Coding Genes

119 genes

# of Chromosomes/Plasmids

2

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
duf3168 domain-containing proteinSPYCA_RS19310Not AvailableNegative2864385 - 286477713726.6
hypothetical proteinSPYCA_RS13780Not AvailableNegative2864774 - 286531919158.0
Minor tail proteinSPYCA_RS13785Not AvailableNegative2865319 - 28656039992.86
hypothetical proteinSPYCA_RS19315Not AvailableNegative2865616 - 28657715281.48
Putative tail fiber proteinSPYCA_RS13790Not AvailableNegative2865768 - 286725550991.6
Putative major capsid proteinSPYCA_RS13795Not AvailableNegative2867379 - 286852139859.1
Putative prohead proteaseSPYCA_RS13800Not AvailableNegative2868564 - 286906717479.3
Hypothetical proteinSPYCA_RS13805Not AvailableNegative2869259 - 286958511153.6
Portal proteinSPYCA_RS13810Not AvailableNegative2869697 - 287080338743.4
giy-yig nuclease family proteinSPYCA_RS13815Not AvailableNegative2870879 - 287117811714.0

Displaying genes 71 – 80 of 3822 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.