Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingopyxidaceae
Genus
Sphingopyxis
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingopyxidaceae |
| Genus | Sphingopyxis |
| Species | Sphingopyxis sp. FD7 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
643589 bp
Thymine Count
635144 bp
Guanine Count
1202579 bp
Cytosine Count
1214302 bp
Genome Length
3695614 bp
Protein-coding Genes
3481 genes
Non-Coding Genes
119 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| p-type conjugative transfer protein trbj | SPYCA_RS01640 | Not Available | Negative | 363120 - 363872 | 28062.5 |
| conjugal transfer protein trbe | SPYCA_RS01645 | Not Available | Negative | 363879 - 366347 | 90177.8 |
| virb3 family type iv secretion system protein | SPYCA_RS01650 | Not Available | Negative | 366341 - 366571 | 8049.06 |
| trbc/virb2 family protein | SPYCA_RS01655 | Not Available | Negative | 366610 - 366963 | 12184.2 |
| p-type conjugative transfer atpase trbb | SPYCA_RS01660 | Not Available | Negative | 366960 - 367982 | 36327.1 |
| hypothetical protein | SPYCA_RS01665 | Not Available | Negative | 367979 - 368404 | 15381.4 |
| conjugal transfer protein trag | SPYCA_RS01670 | Not Available | Negative | 368407 - 370434 | 74776.5 |
| hypothetical protein | SPYCA_RS01675 | Not Available | Positive | 370777 - 371115 | 12074.8 |
| helix-turn-helix domain-containing protein | SPYCA_RS01680 | Not Available | Positive | 371112 - 371486 | 14152.7 |
| imma/irre family metallo-endopeptidase | SPYCA_RS01685 | Not Available | Positive | 371490 - 372500 | 37352.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
