Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingopyxidaceae
Genus
Sphingopyxis
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingopyxidaceae |
| Genus | Sphingopyxis |
| Species | Sphingopyxis sp. FD7 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
643589 bp
Thymine Count
635144 bp
Guanine Count
1202579 bp
Cytosine Count
1214302 bp
Genome Length
3695614 bp
Protein-coding Genes
3481 genes
Non-Coding Genes
119 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| virb3 family type iv secretion system protein | SPYCA_RS17400 | Not Available | Negative | 3595452 - 3595727 | 9754.11 |
| trbc/virb2 family protein | SPYCA_RS17405 | Not Available | Negative | 3595727 - 3596056 | 11189.9 |
| p-type conjugative transfer atpase trbb | SPYCA_RS17410 | Not Available | Negative | 3596056 - 3597039 | 34495.7 |
| giy-yig nuclease family protein | SPYCA_RS17415 | Not Available | Negative | 3597179 - 3598366 | 44139.3 |
| dead/deah box helicase | SPYCA_RS17420 | Not Available | Negative | 3598359 - 3600422 | 75653.2 |
| class i sam-dependent dna methyltransferase | SPYCA_RS17425 | Not Available | Negative | 3600428 - 3603178 | 103411.0 |
| dead/deah box helicase | SPYCA_RS17430 | Not Available | Negative | 3603451 - 3606957 | 128165.0 |
| hachiman antiphage defense system protein hama | SPYCA_RS17435 | Not Available | Negative | 3606941 - 3607717 | 27571.9 |
| duf2971 domain-containing protein | SPYCA_RS17440 | Not Available | Negative | 3607863 - 3608810 | 35507.3 |
| hypothetical protein | SPYCA_RS17445 | Not Available | Negative | 3608901 - 3609497 | 21850.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
