Sphingopyxis sp. FD7

Rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Sphingomonadales

Family

Sphingopyxidaceae

Genus

Sphingopyxis

Description

Sphingopyxis sp. FD7 is a rod-shaped bacterium characterized by its unique genetic composition, possessing two replicons. The organism is cataloged under the accessions NZ_AP017899.1 and NZ_AP017898.1, which provide essential genomic information for further studies and classification. The rod shape of Sphingopyxis sp. FD7 suggests a potential adaptability to various habitats, as this morphology is common among bacteria that thrive in diverse environmental conditions. Furthermore, the presence of two replicons may indicate a complex regulatory network for gene expression and replication, which could enhance its survival and metabolic capabilities. Given its classification within the Sphingopyxis genus, this bacterium may play a role in biogeochemical cycles, particularly in the degradation of organic compounds. Sphingopyxis species are often associated with environments rich in organic matter, where they contribute to nutrient cycling by breaking down complex molecules. In summary, the rod-shaped Sphingopyxis sp. FD7, with its dual replicon structure, embodies traits that may facilitate its ecological role in organic matter decomposition. This positioning within the environment underscores the significance of Sphingopyxis sp. FD7 in microbial communities and its potential contributions to ecosystem functioning.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderSphingomonadales
FamilySphingopyxidaceae
GenusSphingopyxis
SpeciesSphingopyxis sp. FD7
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Sphingopyxis sp. FD7 chromosome, complete genome.

Gene Summary

Adenine Count

643589 bp

Thymine Count

635144 bp

Guanine Count

1202579 bp

Cytosine Count

1214302 bp

Genome Length

3695614 bp

Protein-coding Genes

3481 genes

Non-Coding Genes

119 genes

# of Chromosomes/Plasmids

2

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
n-acyl homoserine lactonase family proteinSPYCA_RS14130Not AvailablePositive2937822 - 293867030523.5
3-isopropylmalate dehydratase small subunitSPYCA_RS14135Not AvailablePositive2938672 - 293927122019.4
nadph:quinone oxidoreductase family proteinSPYCA_RS14140Not AvailablePositive2939364 - 294035934601.6
hypothetical proteinSPYCA_RS14145Not AvailablePositive2940467 - 294076010970.2
type ii toxin-antitoxin system pard family antitoxinSPYCA_RS14150Not AvailablePositive2940804 - 29410559503.21
type ii toxin-antitoxin system rele/pare family toxinSPYCA_RS14155Not AvailablePositive2941057 - 294134411045.0
succinate dehydrogenase flavoprotein subunitSPYCA_RS14160Not AvailableNegative2941409 - 294321165212.2
succinate dehydrogenase, hydrophobic membrane anchor proteinSPYCA_RS14165Not AvailableNegative2943213 - 294361714451.1
succinate dehydrogenase, cytochrome b556 subunitSPYCA_RS14170Not AvailableNegative2943610 - 294405315989.4
tonb-dependent receptorSPYCA_RS14175Not AvailableNegative2944427 - 294715696646.4

Displaying genes 2871 – 2880 of 3822 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.