Spiroplasma sp. NBRC 100390

Kingdom

Bacillati

Phylum

Mycoplasmatota

Class

Mollicutes

Order

Entomoplasmatales

Family

Spiroplasmataceae

Genus

Spiroplasma

Description

Spiroplasma sp. NBRC 100390 is characterized by having a single replicon, which is indicative of its genomic organization. The organism's genomic data can be accessed through the accession number NZ_CP018022.1. This specific strain of Spiroplasma is part of a group known for its unique helical shape and absence of a cell wall, which distinguishes it from many other bacteria. Spiroplasma species, including NBRC 100390, are often associated with plant hosts and can be found in various environmental contexts. They are known to be endosymbionts, meaning they live within the tissues of other organisms, and they can influence their hosts' biology. The presence of a single replicon suggests that Spiroplasma sp. NBRC 100390 may have streamlined its genetic material for efficiency in its ecological niche. This organism's adaptability and specialized lifestyle highlight its role in ecological interactions, particularly within the plant microbiome. By residing in plant tissues, Spiroplasma sp. can potentially affect plant health and development, contributing to the dynamics of host interactions in their respective ecosystems. The ability to thrive in such environments underscores the importance of understanding the biology of Spiroplasma sp. NBRC 100390 for insights into plant-microbe relationships and the broader ecological implications.

Taxonomy

KingdomBacillati
PhylumMycoplasmatota
ClassMollicutes
OrderEntomoplasmatales
FamilySpiroplasmataceae
GenusSpiroplasma
SpeciesSpiroplasma sp. NBRC 100390
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Spiroplasma sp. NBRC 100390 chromosome, complete genome.

Gene Summary

Adenine Count

430172 bp

Thymine Count

424648 bp

Guanine Count

174673 bp

Cytosine Count

170128 bp

Genome Length

1199621 bp

Protein-coding Genes

1043 genes

Non-Coding Genes

38 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
fructose-specific pts transporter subunit eiicS100390_RS00300Not AvailablePositive76287 - 7849478388.0
hypothetical proteinS100390_RS00305Not AvailablePositive78578 - 788239494.2
ywaf family proteinS100390_RS00310Not AvailablePositive78841 - 7999844276.0
mate family efflux transporterS100390_RS00315Not AvailablePositive80066 - 8174263165.6
2-oxo acid dehydrogenase subunit e2S100390_RS00320Not AvailablePositive81910 - 84975115098.0
yigz family proteinS100390_RS00325Not AvailableNegative85009 - 8561423638.2
hypothetical proteinS100390_RS00330Not AvailablePositive86176 - 8664916768.9
Trna-hisNot AvailableNot AvailablePositive86983 - 87058Not Available
duf402 domain-containing proteinS100390_RS00340Not AvailablePositive87346 - 8788821685.2
glycoside hydrolase family 1 proteinS100390_RS00345Not AvailablePositive88052 - 8945855100.4

Displaying genes 61 – 70 of 1081 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.