Spiroplasma sp. NBRC 100390

Kingdom

Bacillati

Phylum

Mycoplasmatota

Class

Mollicutes

Order

Entomoplasmatales

Family

Spiroplasmataceae

Genus

Spiroplasma

Description

Spiroplasma sp. NBRC 100390 is characterized by having a single replicon, which is indicative of its genomic organization. The organism's genomic data can be accessed through the accession number NZ_CP018022.1. This specific strain of Spiroplasma is part of a group known for its unique helical shape and absence of a cell wall, which distinguishes it from many other bacteria. Spiroplasma species, including NBRC 100390, are often associated with plant hosts and can be found in various environmental contexts. They are known to be endosymbionts, meaning they live within the tissues of other organisms, and they can influence their hosts' biology. The presence of a single replicon suggests that Spiroplasma sp. NBRC 100390 may have streamlined its genetic material for efficiency in its ecological niche. This organism's adaptability and specialized lifestyle highlight its role in ecological interactions, particularly within the plant microbiome. By residing in plant tissues, Spiroplasma sp. can potentially affect plant health and development, contributing to the dynamics of host interactions in their respective ecosystems. The ability to thrive in such environments underscores the importance of understanding the biology of Spiroplasma sp. NBRC 100390 for insights into plant-microbe relationships and the broader ecological implications.

Taxonomy

KingdomBacillati
PhylumMycoplasmatota
ClassMollicutes
OrderEntomoplasmatales
FamilySpiroplasmataceae
GenusSpiroplasma
SpeciesSpiroplasma sp. NBRC 100390
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Spiroplasma sp. NBRC 100390


Gene Summary

Adenine Count

430172 bp

Thymine Count

424648 bp

Guanine Count

174673 bp

Cytosine Count

170128 bp

Genome Length

1199621 bp

Protein-coding Genes

1043 genes

Non-Coding Genes

38 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
dna polymerase iii subunit delta'S100390_RS00055Not AvailablePositive12610 - 1344632289.9
trna1(val) (adenine(37)-n6)-methyltransferaseS100390_RS00060Not AvailablePositive13448 - 1417027487.5
trna lysidine(34) synthetase tilsS100390_RS00065Not AvailablePositive14180 - 1548751635.9
atp-dependent zinc metalloprotease ftshS100390_RS00070Not AvailablePositive15560 - 1758174819.1
hsp33 family molecular chaperone hsloS100390_RS00075Not AvailablePositive17671 - 1854031932.3
abc transporter atp-binding proteinS100390_RS00080Not AvailablePositive18655 - 1959034872.2
hypothetical proteinS100390_RS00085Not AvailablePositive19683 - 2053433420.7
abc transporter permeaseS100390_RS00090Not AvailablePositive20581 - 23931125691.0
trna dihydrouridine synthase dusbS100390_RS00095Not AvailablePositive24109 - 2509837188.0
lysine--trna ligaseS100390_RS00100Not AvailablePositive25115 - 2661757881.4

Displaying genes 11 – 20 of 1081 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.