Pseudooceanicola sp.

rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Rhodobacterales

Family

Paracoccaceae

Genus

Pseudooceanicola

Description

Pseudooceanicola sp. is characterized as a Gram-negative bacterium exhibiting a rod-shaped morphology. This organism has been cataloged with a single replicon, indicating a streamlined genetic structure that may influence its adaptability and replication efficiency. The bacterium is identified by the accession number PALA00000000.1, which serves as a reference point for genomic studies and classification within microbiological databases. The Gram-negative nature of Pseudooceanicola sp. suggests that it possesses a thin peptidoglycan layer surrounded by an outer membrane, a feature that could contribute to its resistance to certain antibiotics and environmental stresses. This structural characteristic may also play a role in its interactions with other microorganisms and its habitat. Understanding the traits of Pseudooceanicola sp. can provide insights into its ecological roles, particularly in marine environments where it may participate in nutrient cycling or interact with other microbial communities. Its single replicon might suggest a specific ecological niche or lifestyle, potentially allowing for efficient resource utilization in its habitat. Overall, the study of Pseudooceanicola sp. contributes to the broader understanding of microbial diversity and function in marine ecosystems.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderRhodobacterales
FamilyParacoccaceae
GenusPseudooceanicola
SpeciesPseudooceanicola sp.
StrainNo strain

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

MAG: Pseudooceanicola sp. isolate SAT54 MHASMcontig_1599306, whole

Gene Summary

Adenine Count

907972 bp

Thymine Count

910104 bp

Guanine Count

1488788 bp

Cytosine Count

1472164 bp

Genome Length

4779610 bp

Protein-coding Genes

0 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
type vi secretion system protein tssaCML02_13850Not AvailablePositive2840538 - 284159337481.3
type vi secretion system contractile sheath small subunitCML02_13855Not AvailablePositive2841667 - 284217618483.2
type vi secretion system contractile sheath large subunitCML02_13860Not AvailablePositive2842186 - 284368255694.5
hypothetical proteinCML02_13865Not AvailablePositive2843750 - 284425618611.0
virulence protein scie typeCML02_13870Not AvailablePositive2844335 - 284515029639.7
type vi secretion system baseplate subunit tsseCML02_13875Not AvailablePositive2845143 - 284564018802.4
type vi secretion system baseplate subunit tssfCML02_13880Not AvailablePositive2845644 - 284752169840.9
type vi secretion system baseplate subunit tssgCML02_13885Not AvailablePositive2847485 - 284856439716.3
type vi secretion system atpase tsshCML02_13890Not AvailablePositive2848561 - 285128798359.8
voltage-gated sodium channelCML02_13895Not AvailablePositive2851592 - 285245232143.8

Displaying genes 2761 – 2770 of 4505 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.