Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingobiaceae
Genus
Sphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingobiaceae |
| Genus | Sphingobium |
| Species | Sphingobium sp. |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 30 |
| Temperature range | Not Available |
| Habitat | showerheads |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
MAG: Sphingobium sp. isolate NP43 MHASMcontig_1078567, whole
Gene Summary
Adenine Count
1020871 bp
Thymine Count
1023313 bp
Guanine Count
1736083 bp
Cytosine Count
1729631 bp
Genome Length
5511802 bp
Protein-coding Genes
5093 genes
Non-Coding Genes
106 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| imidazole glycerol phosphate synthase subunit hish | CMN60_12555 | Not Available | Positive | 2559689 - 2560303 | 21654.9 |
| 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino]imidazole-4- carboxamide isomerase | CMN60_12560 | Not Available | Positive | 2560331 - 2561068 | 25311.2 |
| imidazole glycerol phosphate synthase subunit hisf | CMN60_12565 | Not Available | Positive | 2561065 - 2561829 | 26279.3 |
| pep-cterm sorting domain-containing protein | CMN60_12570 | Not Available | Positive | 2561956 - 2562225 | 8818.85 |
| phosphoribosyl-atp diphosphatase | CMN60_12575 | Not Available | Positive | 2562268 - 2562588 | 11432.7 |
| hypothetical protein | CMN60_12580 | Not Available | Positive | 2562649 - 2563218 | 19652.2 |
| histone deacetylase | CMN60_12585 | Not Available | Negative | 2563223 - 2564122 | 32387.8 |
| murein l,d-transpeptidase | CMN60_12590 | Not Available | Positive | 2564179 - 2565648 | 53036.4 |
| hypothetical protein | CMN60_12595 | Not Available | Positive | 2565653 - 2565967 | 10898.7 |
| twin-arginine translocation pathway signal protein | CMN60_12600 | Not Available | Positive | 2566020 - 2566691 | 23759.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

