Sphingobium sp.

aerobic

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Sphingomonadales

Family

Sphingobiaceae

Genus

Sphingobium

Description

Sphingobium sp. is a genus of bacteria notable for its presence in showerheads, which can serve as a unique habitat for microbial communities. This organism is characterized by the presence of flagella, indicating motility and the ability to navigate through its environment. Genetic analysis reveals that Sphingobium sp. possesses five replicons, which suggests a complex genetic structure that may contribute to its adaptability and metabolic capabilities. The identification of Sphingobium sp. is supported by multiple genomic accessions, including QFQF00000000.1, PBYH00000000.1, PBXY00000000.1, QFOA00000000.1, and QFQL00000000.1. These accessions provide a foundation for further studies on the genetic diversity and functional potential of this bacterium within its niche. The ecological insight from the presence of Sphingobium sp. in showerheads highlights the potential for microbial colonization in aqueous environments typically associated with human activity. The ability of this bacterium to thrive in such locations may indicate its role in biofilm formation, which can have implications for water quality and hygiene. Understanding the microbial dynamics in showerheads could lead to improved management strategies for microbial populations in domestic water systems, emphasizing the importance of studying bacteria like Sphingobium sp. in diverse environments.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderSphingomonadales
FamilySphingobiaceae
GenusSphingobium
SpeciesSphingobium sp.
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsaerobic
Optimal temperature30
Temperature rangeNot Available
Habitatshowerheads
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

MAG: Sphingobium sp. isolate NP43 MHASMcontig_1078567, whole

Gene Summary

Adenine Count

1020871 bp

Thymine Count

1023313 bp

Guanine Count

1736083 bp

Cytosine Count

1729631 bp

Genome Length

5511802 bp

Protein-coding Genes

5093 genes

Non-Coding Genes

106 genes

# of Chromosomes/Plasmids

5

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
tim44 domain-containing proteinCMN60_10190Not AvailablePositive2094879 - 209553223813.2
hypothetical proteinCMN60_10195Not AvailablePositive2095552 - 209681143726.2
dna mismatch repair protein mutsCMN60_10200Not AvailablePositive2096823 - 209736219284.4
ggdef-domain containing proteinCMN60_10205Not AvailablePositive2097463 - 209914860726.0
succinyl-diaminopimelate desuccinylaseCMN60_10210Not AvailableNegative2099152 - 210029740179.0
cupin domain-containing proteinCMN60_10215Not AvailablePositive2100355 - 210079816174.9
ld-carboxypeptidaseCMN60_10220Not AvailablePositive2100846 - 210184135167.4
histidine phosphatase family proteinCMN60_10225Not AvailableNegative2101838 - 210242820736.5
3-deoxy-manno-octulosonate cytidylyltransferaseCMN60_10230Not AvailableNegative2102434 - 210324328825.6
kpsf/gutq family sugar-phosphate isomeraseCMN60_10235Not AvailableNegative2103240 - 210425035808.8

Displaying genes 7251 – 7260 of 22806 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.