Sphingobium sp.

aerobic

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Sphingomonadales

Family

Sphingobiaceae

Genus

Sphingobium

Description

Sphingobium sp. is a genus of bacteria notable for its presence in showerheads, which can serve as a unique habitat for microbial communities. This organism is characterized by the presence of flagella, indicating motility and the ability to navigate through its environment. Genetic analysis reveals that Sphingobium sp. possesses five replicons, which suggests a complex genetic structure that may contribute to its adaptability and metabolic capabilities. The identification of Sphingobium sp. is supported by multiple genomic accessions, including QFQF00000000.1, PBYH00000000.1, PBXY00000000.1, QFOA00000000.1, and QFQL00000000.1. These accessions provide a foundation for further studies on the genetic diversity and functional potential of this bacterium within its niche. The ecological insight from the presence of Sphingobium sp. in showerheads highlights the potential for microbial colonization in aqueous environments typically associated with human activity. The ability of this bacterium to thrive in such locations may indicate its role in biofilm formation, which can have implications for water quality and hygiene. Understanding the microbial dynamics in showerheads could lead to improved management strategies for microbial populations in domestic water systems, emphasizing the importance of studying bacteria like Sphingobium sp. in diverse environments.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderSphingomonadales
FamilySphingobiaceae
GenusSphingobium
SpeciesSphingobium sp.
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsaerobic
Optimal temperature30
Temperature rangeNot Available
Habitatshowerheads
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

MAG: Sphingobium sp. isolate NP43 MHASMcontig_1078567, whole

Gene Summary

Adenine Count

1020871 bp

Thymine Count

1023313 bp

Guanine Count

1736083 bp

Cytosine Count

1729631 bp

Genome Length

5511802 bp

Protein-coding Genes

5093 genes

Non-Coding Genes

106 genes

# of Chromosomes/Plasmids

5

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
non-canonical purine ntp pyrophosphatase, rdgb/ham1 familyCMN60_08920Not AvailablePositive1837880 - 183850922103.1
hypothetical proteinCMN60_08925Not AvailableNegative1838514 - 183932027314.8
coproporphyrinogen iii oxidaseCMN60_08930Not AvailablePositive1839464 - 184064542468.4
hypothetical proteinCMN60_08935Not AvailableNegative1840653 - 184117117722.2
rna methyltransferaseCMN60_08940Not AvailableNegative1841264 - 184243941849.1
imp dehydrogenaseCMN60_08945Not AvailableNegative1842541 - 184399851121.7
dihydrolipoyl dehydrogenaseCMN60_08950Not AvailableNegative1844198 - 184559848474.7
dihydrolipoyllysine-residue succinyltransferaseCMN60_08955Not AvailableNegative1845738 - 184699443676.4
2-oxoglutarate dehydrogenase e1 componentCMN60_08960Not AvailableNegative1847004 - 1849799102983.0
succinate--coa ligase subunit alphaCMN60_08965Not AvailableNegative1849891 - 185077529987.4

Displaying genes 7001 – 7010 of 22806 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.