Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingobiaceae
Genus
Sphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingobiaceae |
| Genus | Sphingobium |
| Species | Sphingobium sp. |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 30 |
| Temperature range | Not Available |
| Habitat | showerheads |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
MAG: Sphingobium sp. isolate NP43 MHASMcontig_1078567, whole
Gene Summary
Adenine Count
1020871 bp
Thymine Count
1023313 bp
Guanine Count
1736083 bp
Cytosine Count
1729631 bp
Genome Length
5511802 bp
Protein-coding Genes
5093 genes
Non-Coding Genes
106 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sarcosine oxidase subunit delta | CMN64_19335 | Not Available | Positive | 3936129 - 3936428 | 11567.5 |
| sarcosine oxidase subunit alpha | CMN64_19340 | Not Available | Positive | 3936425 - 3939418 | 107853.0 |
| sarcosine oxidase | CMN64_19345 | Not Available | Positive | 3939434 - 3939994 | 20320.3 |
| serine hydroxymethyltransferase | CMN64_19350 | Not Available | Positive | 3940127 - 3941395 | 45271.9 |
| l-serine ammonia-lyase | CMN64_19355 | Not Available | Positive | 3941444 - 3942829 | 48417.8 |
| formaldehyde dehydrogenase, glutathione-independent | CMN64_19360 | Not Available | Positive | 3943016 - 3944203 | 41687.1 |
| bcct family transporter | CMN64_19365 | Not Available | Positive | 3944347 - 3946338 | 72000.0 |
| arac family transcriptional regulator | CMN64_19370 | Not Available | Negative | 3946433 - 3947584 | 42225.9 |
| electron transfer flavoprotein subunit beta | CMN64_19375 | Not Available | Positive | 3947823 - 3948572 | 26563.4 |
| electron transfer flavoprotein subunit alpha | CMN64_19380 | Not Available | Positive | 3948593 - 3949525 | 32598.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

