Sphingobium sp.

aerobic

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Sphingomonadales

Family

Sphingobiaceae

Genus

Sphingobium

Description

Sphingobium sp. is a genus of bacteria notable for its presence in showerheads, which can serve as a unique habitat for microbial communities. This organism is characterized by the presence of flagella, indicating motility and the ability to navigate through its environment. Genetic analysis reveals that Sphingobium sp. possesses five replicons, which suggests a complex genetic structure that may contribute to its adaptability and metabolic capabilities. The identification of Sphingobium sp. is supported by multiple genomic accessions, including QFQF00000000.1, PBYH00000000.1, PBXY00000000.1, QFOA00000000.1, and QFQL00000000.1. These accessions provide a foundation for further studies on the genetic diversity and functional potential of this bacterium within its niche. The ecological insight from the presence of Sphingobium sp. in showerheads highlights the potential for microbial colonization in aqueous environments typically associated with human activity. The ability of this bacterium to thrive in such locations may indicate its role in biofilm formation, which can have implications for water quality and hygiene. Understanding the microbial dynamics in showerheads could lead to improved management strategies for microbial populations in domestic water systems, emphasizing the importance of studying bacteria like Sphingobium sp. in diverse environments.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderSphingomonadales
FamilySphingobiaceae
GenusSphingobium
SpeciesSphingobium sp.
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsaerobic
Optimal temperature30
Temperature rangeNot Available
Habitatshowerheads
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

MAG: Sphingobium sp. isolate NP43 MHASMcontig_1078567, whole

Gene Summary

Adenine Count

1020871 bp

Thymine Count

1023313 bp

Guanine Count

1736083 bp

Cytosine Count

1729631 bp

Genome Length

5511802 bp

Protein-coding Genes

5093 genes

Non-Coding Genes

106 genes

# of Chromosomes/Plasmids

5

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
signal recognition particle proteinCMN64_14890Not AvailablePositive2996601 - 299807651826.8
30s ribosomal protein s16CMN64_14895Not AvailablePositive2998206 - 299865516039.8
16s rrna processing protein rimmCMN64_14900Not AvailablePositive2998661 - 299915517062.5
abrb/maze/spovt family dna-binding domain-containing proteinCMN64_14905Not AvailablePositive2999187 - 299945610097.9
vapc toxin family pin domain ribonucleaseCMN64_14910Not AvailablePositive2999453 - 299982713373.1
hypothetical proteinCMN64_14915Not AvailablePositive2999884 - 30001569429.16
trna (guanosine(37)-n1)-methyltransferase trmdCMN64_14920Not AvailablePositive3000153 - 300089026607.0
50s ribosomal protein l19CMN64_14925Not AvailablePositive3000897 - 300126513724.7
tonb-dependent receptorCMN64_14930Not AvailablePositive3001598 - 300427395809.9
gnat family n-acetyltransferaseCMN64_14935Not AvailablePositive3004340 - 300486718713.5

Displaying genes 2951 – 2960 of 22806 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.