Sphingobium sp.

aerobic

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Sphingomonadales

Family

Sphingobiaceae

Genus

Sphingobium

Description

Sphingobium sp. is a genus of bacteria notable for its presence in showerheads, which can serve as a unique habitat for microbial communities. This organism is characterized by the presence of flagella, indicating motility and the ability to navigate through its environment. Genetic analysis reveals that Sphingobium sp. possesses five replicons, which suggests a complex genetic structure that may contribute to its adaptability and metabolic capabilities. The identification of Sphingobium sp. is supported by multiple genomic accessions, including QFQF00000000.1, PBYH00000000.1, PBXY00000000.1, QFOA00000000.1, and QFQL00000000.1. These accessions provide a foundation for further studies on the genetic diversity and functional potential of this bacterium within its niche. The ecological insight from the presence of Sphingobium sp. in showerheads highlights the potential for microbial colonization in aqueous environments typically associated with human activity. The ability of this bacterium to thrive in such locations may indicate its role in biofilm formation, which can have implications for water quality and hygiene. Understanding the microbial dynamics in showerheads could lead to improved management strategies for microbial populations in domestic water systems, emphasizing the importance of studying bacteria like Sphingobium sp. in diverse environments.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderSphingomonadales
FamilySphingobiaceae
GenusSphingobium
SpeciesSphingobium sp.
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsaerobic
Optimal temperature30
Temperature rangeNot Available
Habitatshowerheads
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

MAG: Sphingobium sp. isolate NP43 MHASMcontig_1078567, whole

Gene Summary

Adenine Count

1020871 bp

Thymine Count

1023313 bp

Guanine Count

1736083 bp

Cytosine Count

1729631 bp

Genome Length

5511802 bp

Protein-coding Genes

5093 genes

Non-Coding Genes

106 genes

# of Chromosomes/Plasmids

5

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
phosphate abc transporter permease subunit pstcCMN64_11720Not AvailablePositive2387992 - 238938648797.6
phosphate abc transporter, permease protein pstaCMN64_11725Not AvailablePositive2389511 - 239075243996.4
phosphate abc transporter atp-binding proteinCMN64_11730Not AvailablePositive2390761 - 239154928833.6
phosphate transport system regulatory protein phouCMN64_11735Not AvailablePositive2391567 - 239225925155.4
phosphate regulon transcriptional regulatory protein phobCMN64_11740Not AvailablePositive2392265 - 239296626236.5
peptide deformylaseCMN64_11745Not AvailableNegative2393070 - 239360019895.1
recombination protein recrCMN64_11750Not AvailableNegative2393669 - 239426521446.0
methionyl-trna formyltransferaseCMN64_11755Not AvailablePositive2394319 - 239522731997.7
trna pseudouridine(38-40) synthase truaCMN64_11760Not AvailablePositive2395280 - 239602327157.5
hypothetical proteinCMN64_11765Not AvailableNegative2396020 - 239673926540.8

Displaying genes 2321 – 2330 of 22806 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.