Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingobiaceae
Genus
Sphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingobiaceae |
| Genus | Sphingobium |
| Species | Sphingobium sp. |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 30 |
| Temperature range | Not Available |
| Habitat | showerheads |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
MAG: Sphingobium sp. isolate NP43 MHASMcontig_1078567, whole
Gene Summary
Adenine Count
1020871 bp
Thymine Count
1023313 bp
Guanine Count
1736083 bp
Cytosine Count
1729631 bp
Genome Length
5511802 bp
Protein-coding Genes
5093 genes
Non-Coding Genes
106 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| rna pyrophosphohydrolase | DI606_17270 | Not Available | Negative | 3539491 - 3539976 | 18541.1 |
| deoxyribodipyrimidine photolyase | DI606_17275 | Not Available | Positive | 3540171 - 3541547 | 51719.9 |
| sam-dependent methyltransferase | DI606_17280 | Not Available | Positive | 3541584 - 3542849 | 47845.0 |
| oxidoreductase | DI606_17285 | Not Available | Negative | 3542854 - 3543564 | 23861.5 |
| amidophosphoribosyltransferase | DI606_17290 | Not Available | Negative | 3543647 - 3545107 | 52894.2 |
| heme abc transporter permease | DI606_17295 | Not Available | Positive | 3545314 - 3546048 | 26465.9 |
| heme exporter protein ccmd | DI606_17300 | Not Available | Positive | 3546054 - 3546185 | 4939.94 |
| cytochrome c maturation protein ccme | DI606_17305 | Not Available | Positive | 3546182 - 3546628 | 15715.2 |
| tonb-dependent receptor | DI606_17310 | Not Available | Positive | 3547084 - 3549012 | 70193.3 |
| atxe2 family lasso peptide isopeptidase | DI606_17315 | Not Available | Positive | 3549057 - 3551087 | 74664.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

