Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingobiaceae
Genus
Sphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingobiaceae |
| Genus | Sphingobium |
| Species | Sphingobium sp. |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 30 |
| Temperature range | Not Available |
| Habitat | showerheads |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
MAG: Sphingobium sp. isolate NP43 MHASMcontig_1078567, whole
Gene Summary
Adenine Count
1020871 bp
Thymine Count
1023313 bp
Guanine Count
1736083 bp
Cytosine Count
1729631 bp
Genome Length
5511802 bp
Protein-coding Genes
5093 genes
Non-Coding Genes
106 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phosphoserine transaminase | DI606_14140 | Not Available | Negative | 2937639 - 2938802 | 41484.3 |
| extensin | DI606_14145 | Not Available | Positive | 2938961 - 2939650 | 24945.9 |
| lysine decarboxylase | DI606_14150 | Not Available | Positive | 2939692 - 2940570 | 33243.8 |
| pyrimidine 5'-nucleotidase | DI606_14155 | Not Available | Positive | 2940630 - 2941295 | 24566.3 |
| 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate n-succinyltransferase | DI606_14160 | Not Available | Positive | 2941298 - 2942137 | 29659.6 |
| duf2891 domain-containing protein | DI606_14165 | Not Available | Negative | 2942167 - 2943156 | 36840.1 |
| duf979 domain-containing protein | DI606_14170 | Not Available | Negative | 2943153 - 2944076 | 32105.5 |
| duf969 domain-containing protein | DI606_14175 | Not Available | Negative | 2944073 - 2944735 | 23587.5 |
| histidine kinase | DI606_14180 | Not Available | Negative | 2944741 - 2944840 | 3448.38 |
| peptidase m28 | DI606_14280 | Not Available | Negative | 2957417 - 2958733 | 46319.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

