Sphingobium sp.

aerobic

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Sphingomonadales

Family

Sphingobiaceae

Genus

Sphingobium

Description

Sphingobium sp. is a genus of bacteria notable for its presence in showerheads, which can serve as a unique habitat for microbial communities. This organism is characterized by the presence of flagella, indicating motility and the ability to navigate through its environment. Genetic analysis reveals that Sphingobium sp. possesses five replicons, which suggests a complex genetic structure that may contribute to its adaptability and metabolic capabilities. The identification of Sphingobium sp. is supported by multiple genomic accessions, including QFQF00000000.1, PBYH00000000.1, PBXY00000000.1, QFOA00000000.1, and QFQL00000000.1. These accessions provide a foundation for further studies on the genetic diversity and functional potential of this bacterium within its niche. The ecological insight from the presence of Sphingobium sp. in showerheads highlights the potential for microbial colonization in aqueous environments typically associated with human activity. The ability of this bacterium to thrive in such locations may indicate its role in biofilm formation, which can have implications for water quality and hygiene. Understanding the microbial dynamics in showerheads could lead to improved management strategies for microbial populations in domestic water systems, emphasizing the importance of studying bacteria like Sphingobium sp. in diverse environments.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderSphingomonadales
FamilySphingobiaceae
GenusSphingobium
SpeciesSphingobium sp.
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsaerobic
Optimal temperature30
Temperature rangeNot Available
Habitatshowerheads
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

MAG: Sphingobium sp. isolate NP43 MHASMcontig_1078567, whole

Gene Summary

Adenine Count

1020871 bp

Thymine Count

1023313 bp

Guanine Count

1736083 bp

Cytosine Count

1729631 bp

Genome Length

5511802 bp

Protein-coding Genes

5093 genes

Non-Coding Genes

106 genes

# of Chromosomes/Plasmids

5

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
phosphoserine transaminaseDI606_14140Not AvailableNegative2937639 - 293880241484.3
extensinDI606_14145Not AvailablePositive2938961 - 293965024945.9
lysine decarboxylaseDI606_14150Not AvailablePositive2939692 - 294057033243.8
pyrimidine 5'-nucleotidaseDI606_14155Not AvailablePositive2940630 - 294129524566.3
2,3,4,5-tetrahydropyridine-2,6-dicarboxylate n-succinyltransferaseDI606_14160Not AvailablePositive2941298 - 294213729659.6
duf2891 domain-containing proteinDI606_14165Not AvailableNegative2942167 - 294315636840.1
duf979 domain-containing proteinDI606_14170Not AvailableNegative2943153 - 294407632105.5
duf969 domain-containing proteinDI606_14175Not AvailableNegative2944073 - 294473523587.5
histidine kinaseDI606_14180Not AvailableNegative2944741 - 29448403448.38
peptidase m28DI606_14280Not AvailableNegative2957417 - 295873346319.1

Displaying genes 21671 – 21680 of 22806 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.