Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingobiaceae
Genus
Sphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingobiaceae |
| Genus | Sphingobium |
| Species | Sphingobium sp. |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 30 |
| Temperature range | Not Available |
| Habitat | showerheads |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
MAG: Sphingobium sp. isolate NP43 MHASMcontig_1078567, whole
Gene Summary
Adenine Count
1020871 bp
Thymine Count
1023313 bp
Guanine Count
1736083 bp
Cytosine Count
1729631 bp
Genome Length
5511802 bp
Protein-coding Genes
5093 genes
Non-Coding Genes
106 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| marr family transcriptional regulator | DI606_13590 | Not Available | Positive | 2829043 - 2829390 | 13141.9 |
| rna polymerase sigma factor | DI606_13595 | Not Available | Positive | 2829723 - 2830220 | 18954.8 |
| hypothetical protein | DI606_13600 | Not Available | Positive | 2830213 - 2831274 | 37667.6 |
| tonb-dependent receptor-like protein | DI606_13605 | Not Available | Positive | 2831321 - 2833945 | 93290.9 |
| atxe2 family lasso peptide isopeptidase | DI606_13610 | Not Available | Positive | 2833951 - 2836179 | 80478.5 |
| hypothetical protein | DI606_13615 | Not Available | Negative | 2836094 - 2837887 | 64633.6 |
| lasso peptide biosynthesis b2 protein | DI606_13620 | Not Available | Negative | 2837887 - 2838552 | 23997.8 |
| hypothetical protein | DI606_13625 | Not Available | Negative | 2838917 - 2839594 | 24701.4 |
| transcriptional regulator | DI606_13630 | Not Available | Negative | 2839558 - 2839974 | 15226.5 |
| hypothetical protein | DI606_13635 | Not Available | Negative | 2840343 - 2841467 | 41298.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

