Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingobiaceae
Genus
Sphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingobiaceae |
| Genus | Sphingobium |
| Species | Sphingobium sp. |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 30 |
| Temperature range | Not Available |
| Habitat | showerheads |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
MAG: Sphingobium sp. isolate NP43 MHASMcontig_1078567, whole
Gene Summary
Adenine Count
1020871 bp
Thymine Count
1023313 bp
Guanine Count
1736083 bp
Cytosine Count
1729631 bp
Genome Length
5511802 bp
Protein-coding Genes
5093 genes
Non-Coding Genes
106 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| rip metalloprotease rsep | DI606_13040 | Not Available | Negative | 2704207 - 2705340 | 40182.5 |
| 1-deoxy-d-xylulose-5-phosphate reductoisomerase | DI606_13045 | Not Available | Negative | 2705337 - 2706494 | 39906.9 |
| phosphatidate cytidylyltransferase | DI606_13050 | Not Available | Negative | 2706491 - 2707270 | 26783.7 |
| isoprenyl transferase | DI606_13055 | Not Available | Negative | 2707275 - 2708015 | 26862.3 |
| ribosome recycling factor | DI606_13060 | Not Available | Negative | 2708059 - 2708616 | 20279.4 |
| ump kinase | DI606_13065 | Not Available | Negative | 2708623 - 2709348 | 25896.3 |
| elongation factor ts | DI606_13070 | Not Available | Negative | 2709463 - 2710389 | 31573.7 |
| 30s ribosomal protein s2 | DI606_13075 | Not Available | Negative | 2710487 - 2711245 | 27156.6 |
| tetr family transcriptional regulator | DI606_13080 | Not Available | Positive | 2711550 - 2712164 | 22825.1 |
| efflux rnd transporter periplasmic adaptor subunit | DI606_13085 | Not Available | Positive | 2712235 - 2713314 | 37003.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

