Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingobiaceae
Genus
Sphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingobiaceae |
| Genus | Sphingobium |
| Species | Sphingobium sp. |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 30 |
| Temperature range | Not Available |
| Habitat | showerheads |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
MAG: Sphingobium sp. isolate NP43 MHASMcontig_1078567, whole
Gene Summary
Adenine Count
1020871 bp
Thymine Count
1023313 bp
Guanine Count
1736083 bp
Cytosine Count
1729631 bp
Genome Length
5511802 bp
Protein-coding Genes
5093 genes
Non-Coding Genes
106 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| acetyl-coa carboxylase carboxyl transferase subunit alpha | DI606_12990 | Not Available | Negative | 2693375 - 2694319 | 33576.2 |
| recombinase xerd | DI606_12995 | Not Available | Negative | 2694330 - 2695262 | 33523.6 |
| hypothetical protein | DI606_13000 | Not Available | Negative | 2695265 - 2697085 | 63334.4 |
| hypothetical protein | DI606_13005 | Not Available | Negative | 2697091 - 2697282 | 7070.63 |
| shikimate kinase | DI606_13010 | Not Available | Positive | 2697382 - 2697930 | 19869.2 |
| 3-dehydroquinate synthase | DI606_13015 | Not Available | Positive | 2697921 - 2699030 | 38918.8 |
| 50s ribosomal protein l31 | DI606_13020 | Not Available | Negative | 2699916 - 2700140 | 8235.7 |
| 3-hydroxyacyl-[acyl-carrier-protein] dehydratase fabz | DI606_13025 | Not Available | Negative | 2700257 - 2700733 | 17166.2 |
| hypothetical protein | DI606_13030 | Not Available | Negative | 2700738 - 2701403 | 22848.3 |
| outer membrane protein assembly factor bama | DI606_13035 | Not Available | Negative | 2701403 - 2704105 | 99732.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

