Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingobiaceae
Genus
Sphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingobiaceae |
| Genus | Sphingobium |
| Species | Sphingobium sp. |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 30 |
| Temperature range | Not Available |
| Habitat | showerheads |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
MAG: Sphingobium sp. isolate NP43 MHASMcontig_1078567, whole
Gene Summary
Adenine Count
1020871 bp
Thymine Count
1023313 bp
Guanine Count
1736083 bp
Cytosine Count
1729631 bp
Genome Length
5511802 bp
Protein-coding Genes
5093 genes
Non-Coding Genes
106 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| elongation factor g | DI606_12630 | Not Available | Negative | 2625470 - 2627271 | 66356.0 |
| 30s ribosomal protein s7 | DI606_12635 | Not Available | Negative | 2627444 - 2627914 | 17658.3 |
| 30s ribosomal protein s12 | DI606_12640 | Not Available | Negative | 2627933 - 2628304 | 13949.2 |
| ggdef-domain containing protein | DI606_12645 | Not Available | Positive | 2628627 - 2630918 | 82941.0 |
| peptidase m23 | DI606_12650 | Not Available | Positive | 2631195 - 2632238 | 37062.0 |
| twin-arginine translocation pathway signal protein | DI606_12655 | Not Available | Negative | 2632263 - 2632928 | 23702.2 |
| hypothetical protein | DI606_12660 | Not Available | Negative | 2632981 - 2633292 | 10770.6 |
| murein l,d-transpeptidase | DI606_12665 | Not Available | Negative | 2633299 - 2634747 | 51955.6 |
| histone deacetylase | DI606_12670 | Not Available | Positive | 2634805 - 2635722 | 32853.3 |
| hypothetical protein | DI606_12675 | Not Available | Negative | 2635697 - 2636269 | 19670.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

