Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingobiaceae
Genus
Sphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingobiaceae |
| Genus | Sphingobium |
| Species | Sphingobium sp. |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 30 |
| Temperature range | Not Available |
| Habitat | showerheads |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
MAG: Sphingobium sp. isolate NP43 MHASMcontig_1078567, whole
Gene Summary
Adenine Count
1020871 bp
Thymine Count
1023313 bp
Guanine Count
1736083 bp
Cytosine Count
1729631 bp
Genome Length
5511802 bp
Protein-coding Genes
5093 genes
Non-Coding Genes
106 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transcription termination/antitermination protein nusa | DI606_12580 | Not Available | Positive | 2615726 - 2617294 | 58019.0 |
| isomerase | DI606_12585 | Not Available | Positive | 2617301 - 2617537 | 8196.75 |
| duf448 domain-containing protein | DI606_12590 | Not Available | Positive | 2617601 - 2618263 | 23235.0 |
| translation initiation factor if-2 | DI606_12595 | Not Available | Positive | 2618330 - 2620900 | 92479.6 |
| 30s ribosome-binding factor rbfa | DI606_12600 | Not Available | Positive | 2620948 - 2621349 | 15144.0 |
| alpha/beta hydrolase | DI606_12605 | Not Available | Positive | 2621413 - 2622309 | 30869.7 |
| thymidine kinase | DI606_12610 | Not Available | Positive | 2622321 - 2622899 | 21541.8 |
| trna pseudouridine(55) synthase trub | DI606_12615 | Not Available | Positive | 2622933 - 2623826 | 31348.2 |
| 30s ribosomal protein s15 | DI606_12620 | Not Available | Positive | 2623844 - 2624113 | 10174.4 |
| polyribonucleotide nucleotidyltransferase | DI606_12625 | Not Available | Positive | 2624288 - 2625469 | 42601.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

