Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingobiaceae
Genus
Sphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingobiaceae |
| Genus | Sphingobium |
| Species | Sphingobium sp. |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 30 |
| Temperature range | Not Available |
| Habitat | showerheads |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
MAG: Sphingobium sp. isolate NP43 MHASMcontig_1078567, whole
Gene Summary
Adenine Count
1020871 bp
Thymine Count
1023313 bp
Guanine Count
1736083 bp
Cytosine Count
1729631 bp
Genome Length
5511802 bp
Protein-coding Genes
5093 genes
Non-Coding Genes
106 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DI606_10060 | Not Available | Positive | 2087555 - 2087764 | 7386.56 |
| lasso peptide biosynthesis b2 protein | DI606_10065 | Not Available | Positive | 2087790 - 2088494 | 25730.8 |
| asparagine synthase | DI606_10070 | Not Available | Positive | 2088533 - 2090182 | 60380.3 |
| atxe2 family lasso peptide isopeptidase | DI606_10075 | Not Available | Negative | 2090204 - 2092297 | 76542.9 |
| tonb-dependent receptor | DI606_10080 | Not Available | Negative | 2092300 - 2094858 | 90529.2 |
| anti-sigma factor | DI606_10085 | Not Available | Negative | 2094946 - 2095947 | 36610.9 |
| rna polymerase | DI606_10090 | Not Available | Negative | 2095944 - 2096489 | 20871.9 |
| sigma-70 family rna polymerase sigma factor | DI606_10095 | Not Available | Positive | 2097213 - 2097524 | 11492.1 |
| rna-directed dna polymerase | DI606_10100 | Not Available | Negative | 2097846 - 2099621 | 66695.1 |
| hypothetical protein | DI606_10105 | Not Available | Positive | 2099863 - 2101590 | 63604.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

