Rodentibacter sp. Ppn85

Rodmicroaerophile

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Pasteurellales

Family

Pasteurellaceae

Genus

Rodentibacter

Description

Rodentibacter sp. Ppn85 is a microaerophilic bacterium characterized by its rod-shaped morphology. This species exhibits a unique adaptation to environments with low oxygen levels, which is typical for microaerophiles. A notable feature of Rodentibacter sp. Ppn85 is its single replicon, indicating a streamlined genomic structure that may contribute to its ecological niche. The accession number for this bacterium is MLHS00000000.1, which provides a reference for researchers seeking to study its genetic and functional attributes. This designation is crucial for cataloging and retrieving genomic information pertinent to Rodentibacter sp. Ppn85. In summary, the traits of Rodentibacter sp. Ppn85 highlight its potential role in specific ecological contexts, particularly in environments where oxygen levels are restricted. Its adaptation to microaerophilic conditions suggests that it may participate in nutrient cycling or symbiotic relationships within its habitat. Understanding such bacteria can offer insights into microbial diversity and the functional dynamics of ecosystems.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderPasteurellales
FamilyPasteurellaceae
GenusRodentibacter
SpeciesRodentibacter sp. Ppn85
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsmicroaerophile
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Rodentibacter sp. Ppn85 contig_106, whole genome shotgun sequence.

Gene Summary

Adenine Count

732261 bp

Thymine Count

734810 bp

Guanine Count

490322 bp

Cytosine Count

494386 bp

Genome Length

2451779 bp

Protein-coding Genes

2105 genes

Non-Coding Genes

101 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
succinate--coa ligase subunit betaBKL51_00645Not AvailableNegative118400 - 11956642055.0
dihydrolipoamide succinyltransferaseBKL51_00650Not AvailableNegative119667 - 12089645385.7
2-oxoglutarate dehydrogenase e1 componentBKL51_00655Not AvailableNegative121008 - 123815106869.0
competence protein comeaBKL51_00660Not AvailableNegative123994 - 12455120028.1
malate dehydrogenaseBKL51_00665Not AvailableNegative124863 - 12579832573.7
arginine repressorBKL51_00670Not AvailablePositive126006 - 12645816441.0
tigr01777 family proteinBKL51_00675Not AvailablePositive126458 - 12735133151.6
bax inhibitor proteinBKL51_00680Not AvailableNegative127408 - 12807324363.5
Trna-serNot AvailableNot AvailablePositive128276 - 128365Not Available
phosphogluconate dehydrogenase (nadp(+)-dependent, decarboxylating)BKL51_00690Not AvailablePositive128519 - 12997353114.5

Displaying genes 181 – 190 of 2206 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.