Rodentibacter sp. Ppn85

Rodmicroaerophile

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Pasteurellales

Family

Pasteurellaceae

Genus

Rodentibacter

Description

Rodentibacter sp. Ppn85 is a microaerophilic bacterium characterized by its rod-shaped morphology. This species exhibits a unique adaptation to environments with low oxygen levels, which is typical for microaerophiles. A notable feature of Rodentibacter sp. Ppn85 is its single replicon, indicating a streamlined genomic structure that may contribute to its ecological niche. The accession number for this bacterium is MLHS00000000.1, which provides a reference for researchers seeking to study its genetic and functional attributes. This designation is crucial for cataloging and retrieving genomic information pertinent to Rodentibacter sp. Ppn85. In summary, the traits of Rodentibacter sp. Ppn85 highlight its potential role in specific ecological contexts, particularly in environments where oxygen levels are restricted. Its adaptation to microaerophilic conditions suggests that it may participate in nutrient cycling or symbiotic relationships within its habitat. Understanding such bacteria can offer insights into microbial diversity and the functional dynamics of ecosystems.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderPasteurellales
FamilyPasteurellaceae
GenusRodentibacter
SpeciesRodentibacter sp. Ppn85
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsmicroaerophile
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Rodentibacter sp. Ppn85 contig_106, whole genome shotgun sequence.

Gene Summary

Adenine Count

732261 bp

Thymine Count

734810 bp

Guanine Count

490322 bp

Cytosine Count

494386 bp

Genome Length

2451779 bp

Protein-coding Genes

2105 genes

Non-Coding Genes

101 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
duf4432 domain-containing proteinBKL51_09570Not AvailableNegative2041714 - 204273038696.6
l-fucose:h+ symporter permeaseBKL51_09575Not AvailableNegative2042741 - 204403047620.5
ribokinaseBKL51_09580Not AvailableNegative2044027 - 204496233946.8
deoxyribose-phosphate aldolaseBKL51_09585Not AvailablePositive2045119 - 204579324003.0
dna-binding transcriptional repressor deorBKL51_09590Not AvailablePositive2045810 - 204654727369.1
hypothetical proteinBKL51_09595Not AvailableNegative2046772 - 204768034890.4
glucan-binding proteinBKL51_09600Not AvailablePositive2047788 - 204890943649.6
mfs transporterBKL51_09605Not AvailablePositive2048902 - 205030850902.2
regulatory protein uhpcBKL51_09610Not AvailableNegative2050370 - 205169549562.7
xylr family transcriptional regulatorBKL51_09615Not AvailableNegative2051836 - 205299944525.3

Displaying genes 1851 – 1860 of 2206 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.