Rodentibacter sp. Ppn85

Rodmicroaerophile

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Pasteurellales

Family

Pasteurellaceae

Genus

Rodentibacter

Description

Rodentibacter sp. Ppn85 is a microaerophilic bacterium characterized by its rod-shaped morphology. This species exhibits a unique adaptation to environments with low oxygen levels, which is typical for microaerophiles. A notable feature of Rodentibacter sp. Ppn85 is its single replicon, indicating a streamlined genomic structure that may contribute to its ecological niche. The accession number for this bacterium is MLHS00000000.1, which provides a reference for researchers seeking to study its genetic and functional attributes. This designation is crucial for cataloging and retrieving genomic information pertinent to Rodentibacter sp. Ppn85. In summary, the traits of Rodentibacter sp. Ppn85 highlight its potential role in specific ecological contexts, particularly in environments where oxygen levels are restricted. Its adaptation to microaerophilic conditions suggests that it may participate in nutrient cycling or symbiotic relationships within its habitat. Understanding such bacteria can offer insights into microbial diversity and the functional dynamics of ecosystems.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderPasteurellales
FamilyPasteurellaceae
GenusRodentibacter
SpeciesRodentibacter sp. Ppn85
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsmicroaerophile
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Rodentibacter sp. Ppn85 contig_106, whole genome shotgun sequence.

Gene Summary

Adenine Count

732261 bp

Thymine Count

734810 bp

Guanine Count

490322 bp

Cytosine Count

494386 bp

Genome Length

2451779 bp

Protein-coding Genes

2105 genes

Non-Coding Genes

101 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
cytochrome c nitrite reductase fe-s proteinBKL51_00330Not AvailableNegative61043 - 6172024982.1
cytochrome c nitrite reductase pentaheme subunitBKL51_00335Not AvailableNegative61717 - 6235524107.6
ammonia-forming cytochrome c nitrite reductase subunit c552BKL51_00340Not AvailableNegative62421 - 6394456647.1
dna-formamidopyrimidine glycosylaseBKL51_00345Not AvailableNegative64539 - 6535430771.7
50s ribosomal protein l33BKL51_00350Not AvailableNegative65426 - 655966563.13
50s ribosomal protein l28BKL51_00355Not AvailableNegative65613 - 658498985.06
hypothetical proteinBKL51_00360Not AvailableNegative66062 - 6672425280.0
bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthaseBKL51_00365Not AvailablePositive66900 - 6810243139.4
deoxyuridine 5'-triphosphate nucleotidohydrolaseBKL51_00370Not AvailablePositive68152 - 6860716483.9
nucleoid occlusion factor slmaBKL51_00375Not AvailablePositive68611 - 6926725441.2

Displaying genes 121 – 130 of 2206 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.