Rodentibacter sp. Ppn85

Rodmicroaerophile

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Pasteurellales

Family

Pasteurellaceae

Genus

Rodentibacter

Description

Rodentibacter sp. Ppn85 is a microaerophilic bacterium characterized by its rod-shaped morphology. This species exhibits a unique adaptation to environments with low oxygen levels, which is typical for microaerophiles. A notable feature of Rodentibacter sp. Ppn85 is its single replicon, indicating a streamlined genomic structure that may contribute to its ecological niche. The accession number for this bacterium is MLHS00000000.1, which provides a reference for researchers seeking to study its genetic and functional attributes. This designation is crucial for cataloging and retrieving genomic information pertinent to Rodentibacter sp. Ppn85. In summary, the traits of Rodentibacter sp. Ppn85 highlight its potential role in specific ecological contexts, particularly in environments where oxygen levels are restricted. Its adaptation to microaerophilic conditions suggests that it may participate in nutrient cycling or symbiotic relationships within its habitat. Understanding such bacteria can offer insights into microbial diversity and the functional dynamics of ecosystems.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderPasteurellales
FamilyPasteurellaceae
GenusRodentibacter
SpeciesRodentibacter sp. Ppn85
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsmicroaerophile
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Rodentibacter sp. Ppn85 contig_106, whole genome shotgun sequence.

Gene Summary

Adenine Count

732261 bp

Thymine Count

734810 bp

Guanine Count

490322 bp

Cytosine Count

494386 bp

Genome Length

2451779 bp

Protein-coding Genes

2105 genes

Non-Coding Genes

101 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
shikimate kinase iBKL51_05165Not AvailablePositive1108392 - 110893420296.3
3-dehydroquinate synthaseBKL51_05170Not AvailablePositive1108977 - 111006539702.6
dna adenine methylaseBKL51_05175Not AvailablePositive1110067 - 111091833134.9
hypothetical proteinBKL51_05180Not AvailableNegative1110908 - 111123712746.5
hypothetical proteinBKL51_05185Not AvailablePositive1111313 - 111161211078.4
preprotein translocase subunit secaBKL51_05190Not AvailablePositive1111732 - 1114425102331.0
8-oxo-dgtp diphosphataseBKL51_05195Not AvailablePositive1114487 - 111490615832.8
dna polymerase iii subunit deltaBKL51_05200Not AvailableNegative1114890 - 111592439857.5
hypothetical proteinBKL51_05205Not AvailableNegative1115924 - 111642718852.0
leucine--trna ligaseBKL51_05210Not AvailableNegative1116485 - 111907397924.1

Displaying genes 1061 – 1070 of 2206 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.