Rodentibacter sp. Ppn85

Rodmicroaerophile

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Pasteurellales

Family

Pasteurellaceae

Genus

Rodentibacter

Description

Rodentibacter sp. Ppn85 is a microaerophilic bacterium characterized by its rod-shaped morphology. This species exhibits a unique adaptation to environments with low oxygen levels, which is typical for microaerophiles. A notable feature of Rodentibacter sp. Ppn85 is its single replicon, indicating a streamlined genomic structure that may contribute to its ecological niche. The accession number for this bacterium is MLHS00000000.1, which provides a reference for researchers seeking to study its genetic and functional attributes. This designation is crucial for cataloging and retrieving genomic information pertinent to Rodentibacter sp. Ppn85. In summary, the traits of Rodentibacter sp. Ppn85 highlight its potential role in specific ecological contexts, particularly in environments where oxygen levels are restricted. Its adaptation to microaerophilic conditions suggests that it may participate in nutrient cycling or symbiotic relationships within its habitat. Understanding such bacteria can offer insights into microbial diversity and the functional dynamics of ecosystems.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderPasteurellales
FamilyPasteurellaceae
GenusRodentibacter
SpeciesRodentibacter sp. Ppn85
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsmicroaerophile
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Rodentibacter sp. Ppn85 contig_106, whole genome shotgun sequence.

Gene Summary

Adenine Count

732261 bp

Thymine Count

734810 bp

Guanine Count

490322 bp

Cytosine Count

494386 bp

Genome Length

2451779 bp

Protein-coding Genes

2105 genes

Non-Coding Genes

101 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
catalaseBKL51_04965Not AvailableNegative1064193 - 106571357667.7
dna polymerase iii subunit gamma/tauBKL51_04970Not AvailableNegative1065911 - 106799578495.4
adenine phosphoribosyltransferaseBKL51_04975Not AvailableNegative1068008 - 106855019871.1
endopeptidaseBKL51_04980Not AvailableNegative1068742 - 106929320544.6
dihydrolipoyl dehydrogenaseBKL51_04985Not AvailableNegative1069463 - 107088750859.7
pyruvate dehydrogenase complex dihydrolipoyllysine-residue acetyltransferaseBKL51_04990Not AvailableNegative1070985 - 107288366240.8
pyruvate dehydrogenase (acetyl-transferring), homodimeric typeBKL51_04995Not AvailableNegative1072945 - 107560299094.4
methylglyoxal synthaseBKL51_05000Not AvailablePositive1075911 - 107636917105.7
hypothetical proteinBKL51_05005Not AvailableNegative1076463 - 107794154460.0
molecular chaperone dnakBKL51_05010Not AvailablePositive1078209 - 108010468120.6

Displaying genes 1021 – 1030 of 2206 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.