Rodentibacter genomosp. 2

Rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Pasteurellales

Family

Pasteurellaceae

Genus

Rodentibacter

Description

Rodentibacter genomosp. 2 is characterized by its rod shape and possesses a single replicon. The genomic data for this organism is available under the accession number MLHO00000000.1. As a member of the genus Rodentibacter, this organism may be associated with rodents, which is noteworthy considering the ecological interactions between rodents and their microbiomes. The presence of a single replicon suggests a streamlined genomic structure that may influence its adaptability and ecological niche. Understanding the genomic features of Rodentibacter genomosp. 2, particularly its rod shape and replicon count, can provide insights into its potential role in the ecosystem it inhabits. For instance, the morphology and genetic configuration of this bacterium may play a significant role in its survival strategies within the microbial communities associated with rodent hosts. This bacterium may contribute to the overall health of its host or interact with other microbial species, affecting the dynamics of the rodent microbiome. In summary, Rodentibacter genomosp. 2, with its rod shape and single replicon, represents a distinct entity within the complex interplay of microbial life associated with rodents, highlighting the importance of studying such organisms for a deeper understanding of host-microbe interactions.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderPasteurellales
FamilyPasteurellaceae
GenusRodentibacter
SpeciesRodentibacter genomosp. 2
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Rodentibacter genomosp. 2 strain 1996246016 contig_105, whole

Gene Summary

Adenine Count

761811 bp

Thymine Count

759605 bp

Guanine Count

501937 bp

Cytosine Count

510647 bp

Genome Length

2534000 bp

Protein-coding Genes

2223 genes

Non-Coding Genes

113 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
hypothetical proteinBKK55_03495Not AvailableNegative748680 - 74939326306.4
excinuclease abc subunit cBKK55_03500Not AvailableNegative749463 - 75128969307.2
3-deoxy-manno-octulosonate cytidylyltransferaseBKK55_03505Not AvailableNegative751291 - 75205528547.6
hypothetical proteinBKK55_03510Not AvailableNegative752106 - 7522856842.33
tetraacyldisaccharide 4'-kinaseBKK55_03515Not AvailableNegative752278 - 75327637765.6
lipid abc transporter permease/atp-binding proteinBKK55_03520Not AvailableNegative753336 - 75508464283.3
dna internalization-related competence protein comec/rec2BKK55_03525Not AvailableNegative755139 - 75752090302.0
rna polymerase-binding protein dksaBKK55_03530Not AvailablePositive757782 - 75821916657.8
poly(a) polymeraseBKK55_03535Not AvailablePositive758318 - 75975756141.8
2-amino-4-hydroxy-6- hydroxymethyldihydropteridine diphosphokinaseBKK55_03540Not AvailablePositive759761 - 76028519958.3

Displaying genes 711 – 720 of 2336 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.