Rodentibacter genomosp. 1

Rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Pasteurellales

Family

Pasteurellaceae

Genus

Rodentibacter

Description

Rodentibacter genomosp. 1 is a bacterium characterized by its rod-shaped morphology. It possesses a single replicon, which suggests a streamlined genomic structure typical of some bacteria. The taxonomic identifier for this species is reflected in the accession number MLHN00000000.1. The limited information available indicates that Rodentibacter genomosp. 1 belongs to a genus that is likely associated with rodent hosts, as suggested by the name "Rodentibacter." This association may imply a specialized ecological role within the microbiota of rodents, potentially influencing both the health of the host and the dynamics of the microbial community in which it resides. Understanding the characteristics of Rodentibacter genomosp. 1 can provide insights into its ecological niche and its interactions with other microorganisms and hosts. The presence of a single replicon may also indicate a certain level of evolutionary adaptation, which could have implications for its survival and function in specific environments, such as the gut microbiome of rodents. Overall, the study of such bacteria contributes to a broader understanding of microbial diversity and host interactions in rodent populations.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderPasteurellales
FamilyPasteurellaceae
GenusRodentibacter
SpeciesRodentibacter genomosp. 1
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Rodentibacter genomosp. 1 strain Ppn416 contig_51, whole genome

Gene Summary

Adenine Count

701030 bp

Thymine Count

710248 bp

Guanine Count

473940 bp

Cytosine Count

466648 bp

Genome Length

2351866 bp

Protein-coding Genes

2036 genes

Non-Coding Genes

187 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
urease subunit alphaBKK54_01445Not AvailablePositive305069 - 30678761606.6
urease accessory protein ureeBKK54_01450Not AvailablePositive306841 - 30739821160.2
urease accessory protein urefBKK54_01455Not AvailablePositive307383 - 30809026450.9
urease accessory protein uregBKK54_01460Not AvailablePositive308239 - 30887423139.0
urease accessory proteinBKK54_01465Not AvailablePositive308972 - 30979030189.6
cytidine deaminaseBKK54_01470Not AvailableNegative309821 - 31069932726.2
dna starvation/stationary phase protection proteinBKK54_01475Not AvailablePositive310992 - 31147418056.4
glutaredoxin, grxb familyBKK54_01480Not AvailableNegative311523 - 31217024927.1
exodeoxyribonuclease v subunit alphaBKK54_01485Not AvailableNegative312172 - 31411273638.2
exodeoxyribonuclease v subunit betaBKK54_01490Not AvailableNegative314112 - 317726139413.0

Displaying genes 391 – 400 of 2223 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.