Rodentibacter genomosp. 1

Rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Pasteurellales

Family

Pasteurellaceae

Genus

Rodentibacter

Description

Rodentibacter genomosp. 1 is a bacterium characterized by its rod-shaped morphology. It possesses a single replicon, which suggests a streamlined genomic structure typical of some bacteria. The taxonomic identifier for this species is reflected in the accession number MLHN00000000.1. The limited information available indicates that Rodentibacter genomosp. 1 belongs to a genus that is likely associated with rodent hosts, as suggested by the name "Rodentibacter." This association may imply a specialized ecological role within the microbiota of rodents, potentially influencing both the health of the host and the dynamics of the microbial community in which it resides. Understanding the characteristics of Rodentibacter genomosp. 1 can provide insights into its ecological niche and its interactions with other microorganisms and hosts. The presence of a single replicon may also indicate a certain level of evolutionary adaptation, which could have implications for its survival and function in specific environments, such as the gut microbiome of rodents. Overall, the study of such bacteria contributes to a broader understanding of microbial diversity and host interactions in rodent populations.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderPasteurellales
FamilyPasteurellaceae
GenusRodentibacter
SpeciesRodentibacter genomosp. 1
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Rodentibacter genomosp. 1 strain Ppn416 contig_51, whole genome

Gene Summary

Adenine Count

701030 bp

Thymine Count

710248 bp

Guanine Count

473940 bp

Cytosine Count

466648 bp

Genome Length

2351866 bp

Protein-coding Genes

2036 genes

Non-Coding Genes

187 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
d-alanyl-d-alanine endopeptidaseBKK54_05700Not AvailableNegative1207149 - 120802432649.7
bifunctional trna (adenosine(37)-c2)-methyltransferase trmg/ribosomal rna large subunit methyltransferase rlmnBKK54_05705Not AvailablePositive1208236 - 120938442818.9
type iv pilus biogenesis/stability protein pilwBKK54_05710Not AvailablePositive1209403 - 120994820665.3
hypothetical proteinBKK54_05715Not AvailablePositive1210018 - 121103437786.4
4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthaseBKK54_05720Not AvailablePositive1211047 - 121215340114.6
histidine--trna ligaseBKK54_05725Not AvailablePositive1212163 - 121343447373.7
hypothetical proteinBKK54_05730Not AvailablePositive1213453 - 121406722462.7
superoxide dismutaseBKK54_05735Not AvailableNegative1214262 - 121490924273.7
heme abc transporter atp-binding protein ccmaBKK54_05740Not AvailablePositive1215190 - 121582823779.7
heme exporter protein ccmbBKK54_05745Not AvailablePositive1215833 - 121649823760.4

Displaying genes 1171 – 1180 of 2223 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.