Rodentibacter trehalosifermentans

Rodmicroaerophile

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Pasteurellales

Family

Pasteurellaceae

Genus

Rodentibacter

Description

Rodentibacter trehalosifermentans is a Gram-negative, non-motile bacterium characterized by its rod shape. It exhibits microaerophilic oxygen requirements, indicating that it thrives in environments with low levels of oxygen. This bacterium has a single replicon, which is consistent with many bacterial species that have streamlined genomic structures. The accession number for Rodentibacter trehalosifermentans is MLHK00000000.1, providing a reference point for researchers seeking genetic and genomic information about this organism. The unique traits of Rodentibacter trehalosifermentans may suggest specific ecological niches it occupies, likely involving environments where microaerophilic conditions are prevalent. Understanding the ecological role of Rodentibacter trehalosifermentans could shed light on its interactions within microbial communities, particularly in host-associated microbiomes or specific habitats with limited oxygen availability. The nature of its metabolic pathways and interactions with other species in its environment remains an area for future research.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderPasteurellales
FamilyPasteurellaceae
GenusRodentibacter
SpeciesRodentibacter trehalosifermentans
StrainNo strain

Profile

Physiology
Gram staining propertiesGram-negative
ShapeRod
Mobilitynon-motile
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsmicroaerophile
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Rodentibacter trehalosifermentans strain H1983213011 contig_104,

Gene Summary

Adenine Count

756882 bp

Thymine Count

762207 bp

Guanine Count

523689 bp

Cytosine Count

528761 bp

Genome Length

2571539 bp

Protein-coding Genes

2332 genes

Non-Coding Genes

186 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
atp-dependent metalloproteaseBKK51_02500Not AvailableNegative516394 - 51829569811.9
23s rrna (uridine(2552)-2'-o)-methyltransferaseBKK51_02505Not AvailableNegative518376 - 51901423759.9
rna-binding proteinBKK51_02510Not AvailablePositive519168 - 51946710969.5
transcription elongation factor greaBKK51_02515Not AvailableNegative519706 - 52018217564.1
arabinose-5-phosphate isomeraseBKK51_02530Not AvailablePositive522403 - 52333834048.4
3-deoxy-d-manno-octulosonate 8-phosphate phosphataseBKK51_02535Not AvailablePositive523348 - 52389019315.5
hypothetical proteinBKK51_02540Not AvailableNegative523933 - 52461926365.8
(2fe-2s)-binding proteinBKK51_02545Not AvailablePositive524727 - 5249759525.5
4-hydroxy-tetrahydrodipicolinate reductaseBKK51_02550Not AvailableNegative524970 - 52578228841.5
hypothetical proteinBKK51_02555Not AvailableNegative525797 - 52642623325.2

Displaying genes 651 – 660 of 2518 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.