Rodentibacter trehalosifermentans

Rodmicroaerophile

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Pasteurellales

Family

Pasteurellaceae

Genus

Rodentibacter

Description

Rodentibacter trehalosifermentans is a Gram-negative, non-motile bacterium characterized by its rod shape. It exhibits microaerophilic oxygen requirements, indicating that it thrives in environments with low levels of oxygen. This bacterium has a single replicon, which is consistent with many bacterial species that have streamlined genomic structures. The accession number for Rodentibacter trehalosifermentans is MLHK00000000.1, providing a reference point for researchers seeking genetic and genomic information about this organism. The unique traits of Rodentibacter trehalosifermentans may suggest specific ecological niches it occupies, likely involving environments where microaerophilic conditions are prevalent. Understanding the ecological role of Rodentibacter trehalosifermentans could shed light on its interactions within microbial communities, particularly in host-associated microbiomes or specific habitats with limited oxygen availability. The nature of its metabolic pathways and interactions with other species in its environment remains an area for future research.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderPasteurellales
FamilyPasteurellaceae
GenusRodentibacter
SpeciesRodentibacter trehalosifermentans
StrainNo strain

Profile

Physiology
Gram staining propertiesGram-negative
ShapeRod
Mobilitynon-motile
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsmicroaerophile
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Rodentibacter trehalosifermentans strain H1983213011 contig_104,

Gene Summary

Adenine Count

756882 bp

Thymine Count

762207 bp

Guanine Count

523689 bp

Cytosine Count

528761 bp

Genome Length

2571539 bp

Protein-coding Genes

2332 genes

Non-Coding Genes

186 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
Copg family transcriptional regulatorBKK51_05190Not AvailableNegative1058224 - 105865215847.6
Toxin-antitoxin system antitoxin component hicbBKK51_05195Not AvailableNegative1058649 - 105909516637.1
Putative transcriptional regulatorBKK51_05200Not AvailableNegative1059166 - 105949512405.8
ToxinBKK51_05205Not AvailableNegative1059504 - 105980912075.4
Terminase atpase subunitBKK51_05210Not AvailablePositive1059885 - 106166067738.1
Portal vertex proteinBKK51_05215Not AvailablePositive1061751 - 106268034842.0
Putative phage-related tail fiber proteinBKK51_05830Not AvailableNegative1186152 - 118656015104.7
Tail proteinBKK51_05835Not AvailableNegative1186562 - 118715222611.8
Baseplate j family protein gp47BKK51_05840Not AvailableNegative1187152 - 118821638761.9
Hypothetical proteinBKK51_05845Not AvailableNegative1188231 - 118858113090.7

Displaying genes 41 – 50 of 2518 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.