Rodentibacter trehalosifermentans

Rodmicroaerophile

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Pasteurellales

Family

Pasteurellaceae

Genus

Rodentibacter

Description

Rodentibacter trehalosifermentans is a Gram-negative, non-motile bacterium characterized by its rod shape. It exhibits microaerophilic oxygen requirements, indicating that it thrives in environments with low levels of oxygen. This bacterium has a single replicon, which is consistent with many bacterial species that have streamlined genomic structures. The accession number for Rodentibacter trehalosifermentans is MLHK00000000.1, providing a reference point for researchers seeking genetic and genomic information about this organism. The unique traits of Rodentibacter trehalosifermentans may suggest specific ecological niches it occupies, likely involving environments where microaerophilic conditions are prevalent. Understanding the ecological role of Rodentibacter trehalosifermentans could shed light on its interactions within microbial communities, particularly in host-associated microbiomes or specific habitats with limited oxygen availability. The nature of its metabolic pathways and interactions with other species in its environment remains an area for future research.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderPasteurellales
FamilyPasteurellaceae
GenusRodentibacter
SpeciesRodentibacter trehalosifermentans
StrainNo strain

Profile

Physiology
Gram staining propertiesGram-negative
ShapeRod
Mobilitynon-motile
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsmicroaerophile
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Rodentibacter trehalosifermentans strain H1983213011 contig_104,

Gene Summary

Adenine Count

756882 bp

Thymine Count

762207 bp

Guanine Count

523689 bp

Cytosine Count

528761 bp

Genome Length

2571539 bp

Protein-coding Genes

2332 genes

Non-Coding Genes

186 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
d-alanyl-d-alanine endopeptidaseBKK51_01625Not AvailableNegative335833 - 33670832584.8
bifunctional trna (adenosine(37)-c2)-methyltransferase trmg/ribosomal rna large subunit methyltransferase rlmnBKK51_01630Not AvailablePositive336921 - 33806942859.9
type iv pilus biogenesis/stability protein pilwBKK51_01635Not AvailablePositive338091 - 33863620773.7
hypothetical proteinBKK51_01640Not AvailablePositive338706 - 33970737067.5
4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthaseBKK51_01645Not AvailablePositive339710 - 34081640131.6
histidine--trna ligaseBKK51_01650Not AvailablePositive340826 - 34209747402.9
hypothetical proteinBKK51_01655Not AvailablePositive342116 - 34273022345.3
isoprenylcysteine carboxyl methyltransferaseBKK51_01660Not AvailablePositive342763 - 34320617223.7
superoxide dismutaseBKK51_01665Not AvailableNegative343249 - 34389324009.5
heme abc transporter atp-binding protein ccmaBKK51_01670Not AvailablePositive344169 - 34480723887.7

Displaying genes 481 – 490 of 2518 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.