Rodentibacter trehalosifermentans

Rodmicroaerophile

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Pasteurellales

Family

Pasteurellaceae

Genus

Rodentibacter

Description

Rodentibacter trehalosifermentans is a Gram-negative, non-motile bacterium characterized by its rod shape. It exhibits microaerophilic oxygen requirements, indicating that it thrives in environments with low levels of oxygen. This bacterium has a single replicon, which is consistent with many bacterial species that have streamlined genomic structures. The accession number for Rodentibacter trehalosifermentans is MLHK00000000.1, providing a reference point for researchers seeking genetic and genomic information about this organism. The unique traits of Rodentibacter trehalosifermentans may suggest specific ecological niches it occupies, likely involving environments where microaerophilic conditions are prevalent. Understanding the ecological role of Rodentibacter trehalosifermentans could shed light on its interactions within microbial communities, particularly in host-associated microbiomes or specific habitats with limited oxygen availability. The nature of its metabolic pathways and interactions with other species in its environment remains an area for future research.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderPasteurellales
FamilyPasteurellaceae
GenusRodentibacter
SpeciesRodentibacter trehalosifermentans
StrainNo strain

Profile

Physiology
Gram staining propertiesGram-negative
ShapeRod
Mobilitynon-motile
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsmicroaerophile
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Rodentibacter trehalosifermentans strain H1983213011 contig_104,

Gene Summary

Adenine Count

756882 bp

Thymine Count

762207 bp

Guanine Count

523689 bp

Cytosine Count

528761 bp

Genome Length

2571539 bp

Protein-coding Genes

2332 genes

Non-Coding Genes

186 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
c4-dicarboxylate abc transporter substrate-binding proteinBKK51_01525Not AvailablePositive309528 - 31049034586.1
c4-dicarboxylate abc transporterBKK51_01530Not AvailablePositive310591 - 31322495261.6
universal stress protein uspaBKK51_01535Not AvailablePositive313267 - 31368915683.1
pts sugar transporterBKK51_01540Not AvailablePositive313902 - 3141598956.66
phosphoenolpyruvate--protein phosphotransferaseBKK51_01545Not AvailablePositive314262 - 31598963533.6
pts glucose transporter subunit iiaBKK51_01550Not AvailablePositive316049 - 31654917958.6
mannose-6-phosphate isomerase, class iBKK51_01555Not AvailablePositive316607 - 31780645048.2
beta-galactosidaseBKK51_01560Not AvailablePositive317928 - 320975117401.0
citrate (si)-synthaseBKK51_01565Not AvailableNegative321039 - 32231347954.7
bifunctional aconitate hydratase 2/2-methylisocitrate dehydrataseBKK51_01570Not AvailableNegative322347 - 32495094890.2

Displaying genes 461 – 470 of 2518 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.