Rodentibacter trehalosifermentans

Rodmicroaerophile

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Pasteurellales

Family

Pasteurellaceae

Genus

Rodentibacter

Description

Rodentibacter trehalosifermentans is a Gram-negative, non-motile bacterium characterized by its rod shape. It exhibits microaerophilic oxygen requirements, indicating that it thrives in environments with low levels of oxygen. This bacterium has a single replicon, which is consistent with many bacterial species that have streamlined genomic structures. The accession number for Rodentibacter trehalosifermentans is MLHK00000000.1, providing a reference point for researchers seeking genetic and genomic information about this organism. The unique traits of Rodentibacter trehalosifermentans may suggest specific ecological niches it occupies, likely involving environments where microaerophilic conditions are prevalent. Understanding the ecological role of Rodentibacter trehalosifermentans could shed light on its interactions within microbial communities, particularly in host-associated microbiomes or specific habitats with limited oxygen availability. The nature of its metabolic pathways and interactions with other species in its environment remains an area for future research.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderPasteurellales
FamilyPasteurellaceae
GenusRodentibacter
SpeciesRodentibacter trehalosifermentans
StrainNo strain

Profile

Physiology
Gram staining propertiesGram-negative
ShapeRod
Mobilitynon-motile
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsmicroaerophile
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Rodentibacter trehalosifermentans strain H1983213011 contig_104,

Gene Summary

Adenine Count

756882 bp

Thymine Count

762207 bp

Guanine Count

523689 bp

Cytosine Count

528761 bp

Genome Length

2571539 bp

Protein-coding Genes

2332 genes

Non-Coding Genes

186 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
formate dehydrogenase-n subunit alphaBKK51_00535Not AvailablePositive111615 - 11403891075.9
formate dehydrogenase subunit betaBKK51_00540Not AvailablePositive114042 - 11496533755.2
formate dehydrogenase subunit gammaBKK51_00545Not AvailablePositive114958 - 11566827812.3
formate dehydrogenase accessory protein fdheBKK51_00550Not AvailablePositive115890 - 11680134395.9
hypothetical proteinBKK51_00555Not AvailablePositive117180 - 11912972896.0
cell envelope biogenesis protein ompaBKK51_00560Not AvailablePositive119146 - 11985027578.0
hypothetical proteinBKK51_00565Not AvailablePositive119852 - 12072433682.3
ribosomal-protein-alanine n-acetyltransferaseBKK51_00570Not AvailableNegative120819 - 12127117440.2
dna polymerase iii subunit psiBKK51_00575Not AvailableNegative121271 - 12167815662.1
hypothetical proteinBKK51_00580Not AvailableNegative121687 - 12226521740.1

Displaying genes 271 – 280 of 2518 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.