Hymenobacter glacialis str. CCM 8648

rod

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Cytophagia

Order

Cytophagales

Family

Hymenobacteraceae

Genus

Hymenobacter

Description

Hymenobacter glacialis str. CCM 8648 is a Gram-negative, rod-shaped bacterium. This organism possesses a single replicon, which is indicative of its genomic structure. The complete genomic data for this strain is available under the accession number MDZC00000000.1. Hymenobacter species, including H. glacialis, are often found in various environmental settings, including extreme environments such as cold habitats. Their adaptation to such conditions may provide insights into the mechanisms of survival and metabolic processes under low-temperature conditions, contributing to our understanding of microbial life in polar ecosystems. The ecological role of Hymenobacter glacialis str. CCM 8648 may involve participation in nutrient cycling and decomposition processes within its habitat. Given its Gram-negative nature, it likely has a complex outer membrane that may enable it to interact with various substrates and environmental factors effectively. The study of this strain could reveal important information about microbial diversity in cold environments and the potential biotechnological applications of cold-adapted bacteria.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassCytophagia
OrderCytophagales
FamilyHymenobacteraceae
GenusHymenobacter
SpeciesHymenobacter glacialis
StrainCCM 8648

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Hymenobacter glacialis str. CCM 8648


Gene Summary

Adenine Count

835809 bp

Thymine Count

834274 bp

Guanine Count

1282288 bp

Cytosine Count

1279304 bp

Genome Length

4231675 bp

Protein-coding Genes

3350 genes

Non-Coding Genes

47 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
5s ribosomal rnaNot AvailableNot AvailablePositive44 - 155Not Available
23s ribosomal rnaNot AvailableNot AvailablePositive268 - 3191Not Available
four helix bundle proteinBEN48_17860Not AvailableNegative3001 - 332712209.3
metalloproteaseBEN48_07675Not AvailablePositive4629 - 731394637.0
hypothetical proteinBEN48_07680Not AvailableNegative7679 - 810415997.6
hypothetical proteinBEN48_07685Not AvailableNegative8337 - 878917331.8
hypothetical proteinBEN48_07690Not AvailableNegative8894 - 924712691.2
bacillithiol biosynthesis deacetylase bshb1BEN48_07695Not AvailableNegative9486 - 1020526021.1
peptidase m23BEN48_07700Not AvailableNegative10323 - 1113830146.6
thioredoxin-disulfide reductaseBEN48_07705Not AvailableNegative11602 - 1253733342.1

Displaying genes 1 – 10 of 3397 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.