Hymenobacter glacialis str. CCM 8648

rod

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Cytophagia

Order

Cytophagales

Family

Hymenobacteraceae

Genus

Hymenobacter

Description

Hymenobacter glacialis str. CCM 8648 is a Gram-negative, rod-shaped bacterium. This organism possesses a single replicon, which is indicative of its genomic structure. The complete genomic data for this strain is available under the accession number MDZC00000000.1. Hymenobacter species, including H. glacialis, are often found in various environmental settings, including extreme environments such as cold habitats. Their adaptation to such conditions may provide insights into the mechanisms of survival and metabolic processes under low-temperature conditions, contributing to our understanding of microbial life in polar ecosystems. The ecological role of Hymenobacter glacialis str. CCM 8648 may involve participation in nutrient cycling and decomposition processes within its habitat. Given its Gram-negative nature, it likely has a complex outer membrane that may enable it to interact with various substrates and environmental factors effectively. The study of this strain could reveal important information about microbial diversity in cold environments and the potential biotechnological applications of cold-adapted bacteria.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassCytophagia
OrderCytophagales
FamilyHymenobacteraceae
GenusHymenobacter
SpeciesHymenobacter glacialis
StrainCCM 8648

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Hymenobacter glacialis str. CCM 8648


Gene Summary

Adenine Count

835809 bp

Thymine Count

834274 bp

Guanine Count

1282288 bp

Cytosine Count

1279304 bp

Genome Length

4231675 bp

Protein-coding Genes

3350 genes

Non-Coding Genes

47 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
rna polymerase subunit sigmaBEN48_07710Not AvailableNegative12682 - 1354532812.4
polyribonucleotide nucleotidyltransferaseBEN48_07715Not AvailableNegative13669 - 1584078610.6
30s ribosomal protein s15BEN48_07720Not AvailableNegative16042 - 1631710596.1
permeaseBEN48_07725Not AvailableNegative16464 - 1790953722.3
atpaseBEN48_07730Not AvailableNegative18020 - 1843315847.5
Trna-metNot AvailableNot AvailablePositive18566 - 18639Not Available
50s ribosomal protein l20BEN48_07740Not AvailableNegative18836 - 1918013125.3
50s ribosomal protein l35BEN48_07745Not AvailableNegative19256 - 194507211.08
translation initiation factor if-3BEN48_07750Not AvailableNegative19535 - 2022425542.9
threonine--trna ligaseBEN48_07755Not AvailableNegative20503 - 2243773050.7

Displaying genes 11 – 20 of 3397 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.