Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pasteurellales
Family
Pasteurellaceae
Genus
Rodentibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pasteurellales |
| Family | Pasteurellaceae |
| Genus | Rodentibacter |
| Species | Rodentibacter myodis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | Rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | microaerophile |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
729520 bp
Thymine Count
726777 bp
Guanine Count
500152 bp
Cytosine Count
509828 bp
Genome Length
2466277 bp
Protein-coding Genes
2140 genes
Non-Coding Genes
176 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| plp-dependent threonine dehydratase | BKL49_11515 | Not Available | Positive | 2369423 - 2370964 | 56533.8 |
| hypothetical protein | BKL49_11525 | Not Available | Negative | 2372378 - 2374263 | 71464.1 |
| hypothetical protein | BKL49_11530 | Not Available | Negative | 2374674 - 2376053 | 54028.3 |
| hypothetical protein | BKL49_11535 | Not Available | Positive | 2376250 - 2376765 | 18837.2 |
| type vi secretion protein | BKL49_11540 | Not Available | Negative | 2376932 - 2380621 | 141675.0 |
| type vi secretion system impa domain-containing protein | BKL49_11545 | Not Available | Negative | 2380625 - 2382079 | 55529.9 |
| type vi secretion protein | BKL49_11550 | Not Available | Negative | 2382081 - 2382719 | 23845.8 |
| hypothetical protein | BKL49_11555 | Not Available | Negative | 2382740 - 2383585 | 32811.6 |
| type vi secretion system-associated protein | BKL49_11560 | Not Available | Negative | 2383585 - 2384931 | 50385.7 |
| type vi secretion system-associated lipoprotein | BKL49_11565 | Not Available | Negative | 2384931 - 2385611 | 25552.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
