Allobosea sp. TND4EK4

rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Hyphomicrobiales

Family

Alloboseaceae

Genus

Allobosea

Description

Allobosea sp. TND4EK4 is a Gram-negative bacterium characterized by its rod shape. It possesses a single replicon, which indicates a streamlined genomic structure that may influence its replication and cellular processes. The organism is cataloged under the accession FTMO00000000.1, which provides a reference point for further genomic and taxonomic studies. The Gram-negative classification of Allobosea sp. TND4EK4 suggests that it has a distinct cell wall structure, characterized by a thin peptidoglycan layer surrounded by an outer membrane. This structural feature can influence the bacterium's interaction with its environment, including its susceptibility to antibiotics and its role in various ecological niches. Understanding the traits of Allobosea sp. TND4EK4 can provide insight into its potential ecological roles, such as its involvement in nutrient cycling or interactions with other microorganisms in its habitat. The single replicon may suggest a specific adaptation to its environment, potentially allowing for efficient resource utilization and rapid response to changes. Further research into the ecological significance of this bacterium could reveal its contributions to microbial communities and its potential applications in biotechnology or environmental microbiology.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderHyphomicrobiales
FamilyAlloboseaceae
GenusAllobosea
SpeciesAllobosea sp. TND4EK4
StrainNo strain

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Bosea sp. TND4EK4 genome assembly, contig: Ga0136738_160, whole

Gene Summary

Adenine Count

780832 bp

Thymine Count

775180 bp

Guanine Count

1579446 bp

Cytosine Count

1582849 bp

Genome Length

4718307 bp

Protein-coding Genes

4377 genes

Non-Coding Genes

103 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
shikimate dehydrogenaseSAMN05880592_12721Not AvailablePositive4393343 - 439417629502.9
dephospho-coa kinaseSAMN05880592_12722Not AvailablePositive4394192 - 439480621888.9
dna polymerase iii, epsilon subunitSAMN05880592_12723Not AvailablePositive4394811 - 439552725781.0
membrane protein terc, possibly involved in tellurium resistanceSAMN05880592_12724Not AvailableNegative4395505 - 439629627927.3
protein translocase subunit secbSAMN05880592_12725Not AvailableNegative4396513 - 439701017981.2
predicted lipid-binding transport protein, tim44 familySAMN05880592_12726Not AvailablePositive4397261 - 439798926208.0
membrane-bound lytic murein transglycosylase aSAMN05880592_12727Not AvailablePositive4397986 - 439915542494.0
dna-nicking endonuclease, smr domainSAMN05880592_12728Not AvailablePositive4399157 - 439971720556.2
transcriptional regulator, contains xre-family hth domainSAMN05880592_12729Not AvailablePositive4399714 - 440008813648.4
sugar or nucleoside kinase, ribokinase familySAMN05880592_12730Not AvailablePositive4400175 - 440117335152.0

Displaying genes 4171 – 4180 of 4480 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.