Allobosea sp. TND4EK4

rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Hyphomicrobiales

Family

Alloboseaceae

Genus

Allobosea

Description

Allobosea sp. TND4EK4 is a Gram-negative bacterium characterized by its rod shape. It possesses a single replicon, which indicates a streamlined genomic structure that may influence its replication and cellular processes. The organism is cataloged under the accession FTMO00000000.1, which provides a reference point for further genomic and taxonomic studies. The Gram-negative classification of Allobosea sp. TND4EK4 suggests that it has a distinct cell wall structure, characterized by a thin peptidoglycan layer surrounded by an outer membrane. This structural feature can influence the bacterium's interaction with its environment, including its susceptibility to antibiotics and its role in various ecological niches. Understanding the traits of Allobosea sp. TND4EK4 can provide insight into its potential ecological roles, such as its involvement in nutrient cycling or interactions with other microorganisms in its habitat. The single replicon may suggest a specific adaptation to its environment, potentially allowing for efficient resource utilization and rapid response to changes. Further research into the ecological significance of this bacterium could reveal its contributions to microbial communities and its potential applications in biotechnology or environmental microbiology.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderHyphomicrobiales
FamilyAlloboseaceae
GenusAllobosea
SpeciesAllobosea sp. TND4EK4
StrainNo strain

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Bosea sp. TND4EK4 genome assembly, contig: Ga0136738_160, whole

Gene Summary

Adenine Count

780832 bp

Thymine Count

775180 bp

Guanine Count

1579446 bp

Cytosine Count

1582849 bp

Genome Length

4718307 bp

Protein-coding Genes

4377 genes

Non-Coding Genes

103 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
cytochrome c, mono-and diheme variantsSAMN05880592_106177Not AvailableNegative2769741 - 277096142979.6
gluconate 2-dehydrogenase alpha chainSAMN05880592_106178Not AvailableNegative2770958 - 277272164285.8
gluconate 2-dehydrogenase gamma chainSAMN05880592_106179Not AvailableNegative2772737 - 277347426729.8
chloride channel protein, cic familySAMN05880592_106180Not AvailablePositive2773736 - 277553562399.0
cyclic phosphodiesterase-like proteinSAMN05880592_106181Not AvailableNegative2775701 - 277621618159.8
carbohydrate abc transporter atp-binding protein, cut1 familySAMN05880592_106182Not AvailablePositive2776336 - 277745138908.2
abc-type uncharacterized transport system ynjbcd, substrate-binding proteinSAMN05880592_106183Not AvailablePositive2777467 - 277859740505.6
abc-type spermidine/putrescine transport system, permease component iSAMN05880592_106184Not AvailablePositive2778763 - 277959929927.5
abc-type spermidine/putrescine transport system, permease component iiSAMN05880592_106185Not AvailablePositive2779596 - 278041129095.4
acetamidase/formamidaseSAMN05880592_106186Not AvailableNegative2780421 - 278135333019.3

Displaying genes 2671 – 2680 of 4480 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.