Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Alloboseaceae
Genus
Allobosea
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Alloboseaceae |
| Genus | Allobosea |
| Species | Allobosea sp. TND4EK4 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
780832 bp
Thymine Count
775180 bp
Guanine Count
1579446 bp
Cytosine Count
1582849 bp
Genome Length
4718307 bp
Protein-coding Genes
4377 genes
Non-Coding Genes
103 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| protocatechuate 3,4-dioxygenase, beta subunit | SAMN05880592_10646 | Not Available | Negative | 2625923 - 2626666 | 28094.4 |
| trap transporter, dctm subunit | SAMN05880592_10647 | Not Available | Negative | 2626820 - 2628703 | 66271.7 |
| hypothetical protein | SAMN05880592_10648 | Not Available | Positive | 2628917 - 2629393 | 17291.9 |
| two-component system, response regulator rega | SAMN05880592_10649 | Not Available | Negative | 2629398 - 2629964 | 20487.6 |
| two-component system, sensor histidine kinase regb | SAMN05880592_10650 | Not Available | Negative | 2630059 - 2631402 | 47644.9 |
| poly(3-hydroxybutyrate) depolymerase | SAMN05880592_10651 | Not Available | Positive | 2631579 - 2632895 | 49117.3 |
| hypothetical protein | SAMN05880592_10652 | Not Available | Positive | 2632980 - 2633720 | 27655.4 |
| hypothetical protein | SAMN05880592_10653 | Not Available | Positive | 2633815 - 2634030 | 7699.3 |
| amidohydrolase | SAMN05880592_10654 | Not Available | Positive | 2634145 - 2635311 | 41084.9 |
| cubico group peptidase, beta-lactamase class c family | SAMN05880592_10655 | Not Available | Positive | 2635317 - 2636816 | 53211.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
