Pseudomonas sp. WPR_5_2

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Pseudomonadales

Family

Pseudomonadaceae

Genus

Pseudomonas

Description

Pseudomonas sp. WPR_5_2 is characterized by having a single replicon, which is an important trait for its genomic organization. The organism is cataloged under the accession number RBLA00000000.1, indicating its unique genetic makeup within the Pseudomonas genus. Pseudomonas species are known for their metabolic versatility and adaptability to various environments, which often allows them to thrive in diverse ecological niches. While specific traits or characteristics of Pseudomonas sp. WPR_5_2 beyond its replicon number and accession are not provided, the general attributes of the Pseudomonas genus suggest that this strain may possess capabilities such as bioremediation, plant growth promotion, or pathogenicity, depending on its ecological context. The ecological insight into Pseudomonas sp. WPR_5_2 lies in its potential role in various biogeochemical processes, which is a hallmark of many Pseudomonas species. Their metabolic flexibility can contribute to nutrient cycling and the degradation of environmental pollutants, making them significant players in soil health and ecosystem dynamics. Therefore, understanding the specific traits and behaviors of Pseudomonas sp. WPR_5_2 could enhance our comprehension of microbial interactions within its habitat and its potential applications in biotechnology and environmental management.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderPseudomonadales
FamilyPseudomonadaceae
GenusPseudomonas
SpeciesPseudomonas sp. WPR_5_2
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Pseudomonas sp. WPR_5_2
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pseudomonas sp. WPR_5_2 Ga0079780_115, whole genome shotgun

Gene Summary

Adenine Count

1374614 bp

Thymine Count

1366178 bp

Guanine Count

2007752 bp

Cytosine Count

2014770 bp

Genome Length

6764613 bp

Protein-coding Genes

6037 genes

Non-Coding Genes

143 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
sugar phosphate permeaseBJ917_0018Not AvailableNegative22694 - 2398647468.8
dehydrogluconokinaseBJ917_0019Not AvailableNegative24061 - 2509537288.4
sugar phosphate isomerase/epimeraseBJ917_0020Not AvailableNegative25088 - 2587028780.3
laci family transcriptional regulatorBJ917_0021Not AvailableNegative26023 - 2704837712.3
Ncrna_class:otherNot AvailableNot AvailablePositive27102 - 27209Not Available
threonine/homoserine/homoserine lactone efflux proteinBJ917_0022Not AvailableNegative27179 - 2778721456.1
arac family transcriptional regulatorBJ917_0023Not AvailableNegative27839 - 2867831666.5
putative membrane proteinBJ917_0024Not AvailableNegative28753 - 2939423431.8
multidrug efflux pumpBJ917_0025Not AvailableNegative29569 - 32667110643.0
membrane fusion protein (multidrug efflux system)BJ917_0026Not AvailableNegative32683 - 3384041367.4

Displaying genes 51 – 60 of 6185 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.