Azospirillum sp. RU38E

Gram-negative

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Rhodospirillales

Family

Azospirillaceae

Genus

Azospirillum

Description

Azospirillum sp. RU38E is a Gram-negative bacterium characterized by having a single replicon. This bacterium is part of the genus Azospirillum, which is known for its role in promoting plant growth through various mechanisms, including nitrogen fixation and the production of plant growth-promoting substances. The complete genomic information for Azospirillum sp. RU38E can be accessed under the accession number FZOI00000000.1. In the context of agricultural microbiology, Azospirillum species are often associated with the rhizosphere of plants, where they can enhance nutrient uptake and improve soil health. The presence of a single replicon suggests a streamlined genetic architecture, potentially indicating efficient replication and adaptability in its environment. Biologically, Azospirillum sp. RU38E may contribute to sustainable agricultural practices by enhancing crop yields and reducing the need for chemical fertilizers. Its nitrogen-fixing capabilities can lead to improved soil fertility, which is crucial for sustainable land management. The ecological insight derived from understanding this bacterium's traits underscores the importance of microbial interactions in the soil ecosystem, demonstrating how beneficial microbes can play a significant role in promoting plant health and productivity.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderRhodospirillales
FamilyAzospirillaceae
GenusAzospirillum
SpeciesAzospirillum sp. RU38E
StrainNo strain

Profile

Physiology
Gram staining propertiesNegative
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Azospirillum sp. RU38E genome assembly, contig: Ga0136730_170,

Gene Summary

Adenine Count

1116281 bp

Thymine Count

1117480 bp

Guanine Count

1945072 bp

Cytosine Count

1949929 bp

Genome Length

6128762 bp

Protein-coding Genes

5120 genes

Non-Coding Genes

99 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
thymidine phosphorylaseSAMN05880556_12919Not AvailablePositive5793170 - 579469653945.3
metallo-beta-lactamase family proteinSAMN05880556_12920Not AvailablePositive5794696 - 579630058852.5
sugar phosphate isomerase/epimeraseSAMN05880556_12921Not AvailableNegative5796317 - 579716229766.0
protein of unknown functionSAMN05880556_12922Not AvailableNegative5797175 - 579812834949.8
cyclic nucleotide-binding domain-containing proteinSAMN05880556_12923Not AvailableNegative5798233 - 579896426689.8
hemolysin activation/secretion proteinSAMN05880556_12924Not AvailablePositive5799313 - 580097157767.5
filamentous hemagglutinin family n-terminal domain-containing proteinSAMN05880556_12925Not AvailablePositive5800980 - 5808578242804.0
autotransporter-associated beta strand repeat-containing proteinSAMN05880556_1301Not AvailableNegative5808579 - 5829778684429.0
transcriptional regulator, lysr familySAMN05880556_1302Not AvailableNegative5830336 - 583127433961.8
catalase-peroxidaseSAMN05880556_1303Not AvailablePositive5831405 - 583358579936.7

Displaying genes 4981 – 4990 of 5219 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.