Azospirillum sp. RU38E

Gram-negative

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Rhodospirillales

Family

Azospirillaceae

Genus

Azospirillum

Description

Azospirillum sp. RU38E is a Gram-negative bacterium characterized by having a single replicon. This bacterium is part of the genus Azospirillum, which is known for its role in promoting plant growth through various mechanisms, including nitrogen fixation and the production of plant growth-promoting substances. The complete genomic information for Azospirillum sp. RU38E can be accessed under the accession number FZOI00000000.1. In the context of agricultural microbiology, Azospirillum species are often associated with the rhizosphere of plants, where they can enhance nutrient uptake and improve soil health. The presence of a single replicon suggests a streamlined genetic architecture, potentially indicating efficient replication and adaptability in its environment. Biologically, Azospirillum sp. RU38E may contribute to sustainable agricultural practices by enhancing crop yields and reducing the need for chemical fertilizers. Its nitrogen-fixing capabilities can lead to improved soil fertility, which is crucial for sustainable land management. The ecological insight derived from understanding this bacterium's traits underscores the importance of microbial interactions in the soil ecosystem, demonstrating how beneficial microbes can play a significant role in promoting plant health and productivity.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderRhodospirillales
FamilyAzospirillaceae
GenusAzospirillum
SpeciesAzospirillum sp. RU38E
StrainNo strain

Profile

Physiology
Gram staining propertiesNegative
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Azospirillum sp. RU38E genome assembly, contig: Ga0136730_170,

Gene Summary

Adenine Count

1116281 bp

Thymine Count

1117480 bp

Guanine Count

1945072 bp

Cytosine Count

1949929 bp

Genome Length

6128762 bp

Protein-coding Genes

5120 genes

Non-Coding Genes

99 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
anti-anti-sigma factorSAMN05880556_11412Not AvailableNegative4418662 - 441896711320.8
chemotaxis phosphatase, chezSAMN05880556_11413Not AvailableNegative4418984 - 441979929432.5
hypothetical proteinSAMN05880556_11414Not AvailablePositive4420043 - 442100835167.9
nadph-dependent ferric siderophore reductase, contains fad-binding and sip domainsSAMN05880556_11415Not AvailableNegative4421021 - 442180028219.5
transcriptional regulator, padr familySAMN05880556_11416Not AvailablePositive4421914 - 442249520717.9
l-rhamnose-h+ transport proteinSAMN05880556_11417Not AvailableNegative4422523 - 442359637673.3
3-oxoacyl-[acyl-carrier protein] reductaseSAMN05880556_11418Not AvailableNegative4423706 - 442446126288.5
2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway)SAMN05880556_11419Not AvailableNegative4424458 - 442532130848.9
l-rhamnonate dehydrataseSAMN05880556_11420Not AvailableNegative4425554 - 442674144018.1
l-rhamnose 1-dehydrogenaseSAMN05880556_11421Not AvailablePositive4426945 - 442770625984.3

Displaying genes 3891 – 3900 of 5219 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.