Azospirillum sp. RU38E

Gram-negative

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Rhodospirillales

Family

Azospirillaceae

Genus

Azospirillum

Description

Azospirillum sp. RU38E is a Gram-negative bacterium characterized by having a single replicon. This bacterium is part of the genus Azospirillum, which is known for its role in promoting plant growth through various mechanisms, including nitrogen fixation and the production of plant growth-promoting substances. The complete genomic information for Azospirillum sp. RU38E can be accessed under the accession number FZOI00000000.1. In the context of agricultural microbiology, Azospirillum species are often associated with the rhizosphere of plants, where they can enhance nutrient uptake and improve soil health. The presence of a single replicon suggests a streamlined genetic architecture, potentially indicating efficient replication and adaptability in its environment. Biologically, Azospirillum sp. RU38E may contribute to sustainable agricultural practices by enhancing crop yields and reducing the need for chemical fertilizers. Its nitrogen-fixing capabilities can lead to improved soil fertility, which is crucial for sustainable land management. The ecological insight derived from understanding this bacterium's traits underscores the importance of microbial interactions in the soil ecosystem, demonstrating how beneficial microbes can play a significant role in promoting plant health and productivity.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderRhodospirillales
FamilyAzospirillaceae
GenusAzospirillum
SpeciesAzospirillum sp. RU38E
StrainNo strain

Profile

Physiology
Gram staining propertiesNegative
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Azospirillum sp. RU38E genome assembly, contig: Ga0136730_170,

Gene Summary

Adenine Count

1116281 bp

Thymine Count

1117480 bp

Guanine Count

1945072 bp

Cytosine Count

1949929 bp

Genome Length

6128762 bp

Protein-coding Genes

5120 genes

Non-Coding Genes

99 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
tonb-dependent receptorSAMN05880556_113131Not AvailablePositive4394757 - 4397720107738.0
tryptophan halogenaseSAMN05880556_113132Not AvailablePositive4398003 - 439951455936.7
protein translocase subunit secf /protein translocase subunit secdSAMN05880556_113133Not AvailableNegative4399582 - 440212290943.1
hypothetical proteinSAMN05880556_113134Not AvailableNegative4402227 - 440253510387.5
dna-binding transcriptional regulator, marr familySAMN05880556_113135Not AvailablePositive4402556 - 440324525521.6
membrane fusion protein, multidrug efflux systemSAMN05880556_113136Not AvailablePositive4403242 - 440431538292.6
mfs transporter, dha2 family, multidrug resistance proteinSAMN05880556_113137Not AvailablePositive4404527 - 440606555132.7
enamine deaminase rida, house cleaning of reactive enamine intermediates, yjgf/yer057c/uk114 familySAMN05880556_113138Not AvailablePositive4406238 - 440658812114.5
fumarase, class i, homodimericSAMN05880556_113139Not AvailablePositive4406741 - 440836358617.2
uncharacterized conserved protein, contains mth938-like domainSAMN05880556_1141Not AvailableNegative4408939 - 440931313371.5

Displaying genes 3871 – 3880 of 5219 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.