Azospirillum sp. RU38E

Gram-negative

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Rhodospirillales

Family

Azospirillaceae

Genus

Azospirillum

Description

Azospirillum sp. RU38E is a Gram-negative bacterium characterized by having a single replicon. This bacterium is part of the genus Azospirillum, which is known for its role in promoting plant growth through various mechanisms, including nitrogen fixation and the production of plant growth-promoting substances. The complete genomic information for Azospirillum sp. RU38E can be accessed under the accession number FZOI00000000.1. In the context of agricultural microbiology, Azospirillum species are often associated with the rhizosphere of plants, where they can enhance nutrient uptake and improve soil health. The presence of a single replicon suggests a streamlined genetic architecture, potentially indicating efficient replication and adaptability in its environment. Biologically, Azospirillum sp. RU38E may contribute to sustainable agricultural practices by enhancing crop yields and reducing the need for chemical fertilizers. Its nitrogen-fixing capabilities can lead to improved soil fertility, which is crucial for sustainable land management. The ecological insight derived from understanding this bacterium's traits underscores the importance of microbial interactions in the soil ecosystem, demonstrating how beneficial microbes can play a significant role in promoting plant health and productivity.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderRhodospirillales
FamilyAzospirillaceae
GenusAzospirillum
SpeciesAzospirillum sp. RU38E
StrainNo strain

Profile

Physiology
Gram staining propertiesNegative
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Azospirillum sp. RU38E genome assembly, contig: Ga0136730_170,

Gene Summary

Adenine Count

1116281 bp

Thymine Count

1117480 bp

Guanine Count

1945072 bp

Cytosine Count

1949929 bp

Genome Length

6128762 bp

Protein-coding Genes

5120 genes

Non-Coding Genes

99 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
hypothetical proteinSAMN05880556_107123Not AvailableNegative3184360 - 318580552993.6
isocitrate lyaseSAMN05880556_107124Not AvailablePositive3186047 - 318733647216.8
sterol desaturase/sphingolipid hydroxylase, fatty acid hydroxylase superfamilySAMN05880556_107125Not AvailablePositive3187664 - 318852432553.4
succinyl-coa:acetate coa-transferaseSAMN05880556_107126Not AvailableNegative3188528 - 319001853649.4
oligopeptide transport system substrate-binding proteinSAMN05880556_107127Not AvailablePositive3190607 - 319219358486.9
oligopeptide transport system substrate-binding proteinSAMN05880556_107128Not AvailablePositive3192328 - 319393258793.4
oligopeptide transport system substrate-binding proteinSAMN05880556_107129Not AvailablePositive3194013 - 319562660691.6
rhodanese-related sulfurtransferaseSAMN05880556_107130Not AvailableNegative3195813 - 319620513824.5
transcriptional regulator, arac family with amidase-like domainSAMN05880556_107131Not AvailablePositive3196278 - 319726735271.4
outer membrane immunogenic proteinSAMN05880556_107132Not AvailablePositive3197575 - 319820422179.8

Displaying genes 2871 – 2880 of 5219 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.