Azospirillum sp. RU38E

Gram-negative

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Rhodospirillales

Family

Azospirillaceae

Genus

Azospirillum

Description

Azospirillum sp. RU38E is a Gram-negative bacterium characterized by having a single replicon. This bacterium is part of the genus Azospirillum, which is known for its role in promoting plant growth through various mechanisms, including nitrogen fixation and the production of plant growth-promoting substances. The complete genomic information for Azospirillum sp. RU38E can be accessed under the accession number FZOI00000000.1. In the context of agricultural microbiology, Azospirillum species are often associated with the rhizosphere of plants, where they can enhance nutrient uptake and improve soil health. The presence of a single replicon suggests a streamlined genetic architecture, potentially indicating efficient replication and adaptability in its environment. Biologically, Azospirillum sp. RU38E may contribute to sustainable agricultural practices by enhancing crop yields and reducing the need for chemical fertilizers. Its nitrogen-fixing capabilities can lead to improved soil fertility, which is crucial for sustainable land management. The ecological insight derived from understanding this bacterium's traits underscores the importance of microbial interactions in the soil ecosystem, demonstrating how beneficial microbes can play a significant role in promoting plant health and productivity.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderRhodospirillales
FamilyAzospirillaceae
GenusAzospirillum
SpeciesAzospirillum sp. RU38E
StrainNo strain

Profile

Physiology
Gram staining propertiesNegative
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Azospirillum sp. RU38E genome assembly, contig: Ga0136730_170,

Gene Summary

Adenine Count

1116281 bp

Thymine Count

1117480 bp

Guanine Count

1945072 bp

Cytosine Count

1949929 bp

Genome Length

6128762 bp

Protein-coding Genes

5120 genes

Non-Coding Genes

99 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
glutamate--putrescine ligaseSAMN05880556_102372Not AvailablePositive1633752 - 163514350172.1
exopolysaccharide biosynthesis protein ybjhSAMN05880556_102373Not AvailablePositive1635291 - 163693758761.7
efflux transporter, outer membrane factor (omf) lipoprotein, nodt familySAMN05880556_102374Not AvailableNegative1636918 - 163836050139.4
macrolide transport system atp-binding/permease proteinSAMN05880556_102375Not AvailableNegative1638386 - 164036570094.5
membrane fusion protein, macrolide-specific efflux systemSAMN05880556_102376Not AvailableNegative1640362 - 164172648697.9
pas domain s-box-containing proteinSAMN05880556_102377Not AvailablePositive1642025 - 1645588128877.0
d-arginine dehydrogenaseSAMN05880556_102378Not AvailableNegative1645800 - 164692740069.2
predicted dna-binding protein, contains ribbon-helix-helix (rhh) domainSAMN05880556_102379Not AvailableNegative1647071 - 164740912477.2
cytochrome p450SAMN05880556_102380Not AvailableNegative1647409 - 164872547064.8
acyl homoserine lactone synthaseSAMN05880556_102381Not AvailableNegative1648735 - 164933422377.1

Displaying genes 1471 – 1480 of 5219 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.