Azospirillum sp. RU38E

Gram-negative

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Rhodospirillales

Family

Azospirillaceae

Genus

Azospirillum

Description

Azospirillum sp. RU38E is a Gram-negative bacterium characterized by having a single replicon. This bacterium is part of the genus Azospirillum, which is known for its role in promoting plant growth through various mechanisms, including nitrogen fixation and the production of plant growth-promoting substances. The complete genomic information for Azospirillum sp. RU38E can be accessed under the accession number FZOI00000000.1. In the context of agricultural microbiology, Azospirillum species are often associated with the rhizosphere of plants, where they can enhance nutrient uptake and improve soil health. The presence of a single replicon suggests a streamlined genetic architecture, potentially indicating efficient replication and adaptability in its environment. Biologically, Azospirillum sp. RU38E may contribute to sustainable agricultural practices by enhancing crop yields and reducing the need for chemical fertilizers. Its nitrogen-fixing capabilities can lead to improved soil fertility, which is crucial for sustainable land management. The ecological insight derived from understanding this bacterium's traits underscores the importance of microbial interactions in the soil ecosystem, demonstrating how beneficial microbes can play a significant role in promoting plant health and productivity.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderRhodospirillales
FamilyAzospirillaceae
GenusAzospirillum
SpeciesAzospirillum sp. RU38E
StrainNo strain

Profile

Physiology
Gram staining propertiesNegative
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Azospirillum sp. RU38E genome assembly, contig: Ga0136730_170,

Gene Summary

Adenine Count

1116281 bp

Thymine Count

1117480 bp

Guanine Count

1945072 bp

Cytosine Count

1949929 bp

Genome Length

6128762 bp

Protein-coding Genes

5120 genes

Non-Coding Genes

99 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
[lsu ribosomal protein l3p]-glutamine n5-methyltransferaseSAMN05880556_102322Not AvailablePositive1565957 - 156689834739.7
hydroxymethylglutaryl-coa lyaseSAMN05880556_102323Not AvailableNegative1566938 - 156783730974.5
gdp-l-fucose synthaseSAMN05880556_102324Not AvailableNegative1568020 - 156900035572.7
gdpmannose 4,6-dehydrataseSAMN05880556_102325Not AvailableNegative1569014 - 157005439358.8
glycosyltransferase involved in cell wall bisynthesisSAMN05880556_102326Not AvailableNegative1570193 - 157130840917.8
sulfate permease, sulp familySAMN05880556_102327Not AvailableNegative1571412 - 157307958062.5
outer membrane receptor proteins, mostly fe transportSAMN05880556_102328Not AvailableNegative1573245 - 157549781792.5
transcriptional regulator, marr familySAMN05880556_102329Not AvailablePositive1575789 - 157700943207.3
n-acetylglucosamine kinaseSAMN05880556_102330Not AvailablePositive1577282 - 157817831350.3
mannose-6-phosphate isomerase, type 3SAMN05880556_102331Not AvailablePositive1578209 - 157936942425.1

Displaying genes 1421 – 1430 of 5219 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.