Janthinobacterium sp. TND4EL3

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Betaproteobacteria

Order

Burkholderiales

Family

Oxalobacteraceae

Genus

Janthinobacterium

Description

Janthinobacterium sp. TND4EL3 is a Gram-negative bacterium characterized by the presence of flagella, which may contribute to its motility. It possesses a single replicon, indicating a streamlined genomic structure typical of many bacteria. The genomic data for Janthinobacterium sp. TND4EL3 can be accessed through the accession number FTMV00000000.1. The presence of flagella in Janthinobacterium sp. TND4EL3 suggests potential adaptability to various environments, possibly aiding in its ability to colonize diverse niches. Gram-negative bacteria, such as Janthinobacterium sp. TND4EL3, often possess unique structural features, including an outer membrane that can influence their interactions with other microorganisms and their environments. In ecological contexts, Janthinobacterium species have been recognized for their roles in soil and water ecosystems, where they may participate in nutrient cycling and interactions with other microbial communities. Their motility, as facilitated by flagella, could enhance their ability to navigate through environments to exploit resources or evade unfavorable conditions. Overall, the traits of Janthinobacterium sp. TND4EL3 highlight its potential significance in microbial ecology and its adaptability in various habitats.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassBetaproteobacteria
OrderBurkholderiales
FamilyOxalobacteraceae
GenusJanthinobacterium
SpeciesJanthinobacterium sp. TND4EL3
StrainNo strain

Profile

Physiology
Gram staining propertiesNegative
ShapeNot Available
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Janthinobacterium sp. TND4EL3 genome assembly, contig:

Gene Summary

Adenine Count

1206811 bp

Thymine Count

1210045 bp

Guanine Count

2065895 bp

Cytosine Count

2032757 bp

Genome Length

6516874 bp

Protein-coding Genes

5742 genes

Non-Coding Genes

165 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
pseudouridine-5'-phosphate glycosidaseSAMN05880566_11019Not AvailableNegative3569835 - 357076432351.3
pseudouridine kinaseSAMN05880566_11020Not AvailableNegative3570768 - 357192540976.9
xanthosine phosphorylaseSAMN05880566_11021Not AvailablePositive3572286 - 357312529360.7
phosphopentomutaseSAMN05880566_11022Not AvailablePositive3573244 - 357443742570.3
deoxyribose-phosphate aldolaseSAMN05880566_11023Not AvailablePositive3574434 - 357539335107.7
aldehyde dehydrogenase (nad+)SAMN05880566_11024Not AvailablePositive3575436 - 357778783047.7
thymidine phosphorylaseSAMN05880566_11025Not AvailablePositive3577863 - 357918546229.1
cytidine deaminaseSAMN05880566_11026Not AvailablePositive3579271 - 357967814376.2
cytosine deaminaseSAMN05880566_11027Not AvailablePositive3579689 - 358090042593.2
zn-dependent dipeptidase, dipeptidase homologSAMN05880566_11028Not AvailableNegative3580897 - 358206041720.0

Displaying genes 3341 – 3350 of 5907 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.