Roseobacter sp.

Gram-negativeRod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Rhodobacterales

Family

Roseobacteraceae

Genus

Roseobacter

Description

Roseobacter sp. is a Gram-negative, rod-shaped bacterium predominantly found in deep-sea habitats. This genus is part of the Roseobacter clade, which is known for its diverse metabolic capabilities and ecological significance, particularly in marine environments. Roseobacter sp. is characterized by having two replicons, which indicates a unique genomic organization that may contribute to its adaptability in the oligotrophic conditions often found in deep-sea ecosystems. The presence of two replicons can influence gene regulation and replication, potentially providing advantages in nutrient acquisition and survival in challenging environments. The accessions for Roseobacter sp. include PCCY00000000.1 and PAKB00000000.1, which are references for genomic data that can provide insights into its genetic makeup and functional potential. This information can be crucial for understanding the roles that Roseobacter sp. plays in biogeochemical cycles, including carbon and sulfur cycling, which are vital for maintaining the health of marine ecosystems. Overall, the ecological role of Roseobacter sp. in deep-sea habitats underscores its importance in microbial communities. Its metabolic versatility and genomic features may allow it to thrive in nutrient-poor environments, thereby contributing to the overall functioning and stability of marine ecosystems.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderRhodobacterales
FamilyRoseobacteraceae
GenusRoseobacter
SpeciesRoseobacter sp.
StrainNo strain

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Roseobacter sp.
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
Habitatdeep-sea
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

MAG: Roseobacter sp. isolate SAT8 MHASMcontig_2226886, whole

Gene Summary

Adenine Count

708818 bp

Thymine Count

718792 bp

Guanine Count

1112635 bp

Cytosine Count

1085866 bp

Genome Length

3640882 bp

Protein-coding Genes

3392 genes

Non-Coding Genes

115 genes

# of Chromosomes/Plasmids

2

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
3-hydroxyacyl-coa dehydrogenaseCMN12_00590Not AvailableNegative104598 - 10552732420.7
histidine phosphatase family proteinCMN12_00595Not AvailableNegative105538 - 10611621139.0
tetr/acrr family transcriptional regulatorCMN12_00600Not AvailableNegative106147 - 10681825020.2
isocitrate dehydrogenase (nadp(+))CMN12_00605Not AvailablePositive107338 - 10955179124.6
phosphomannomutase/phosphoglucomutaseCMN12_00610Not AvailablePositive109769 - 11125354312.6
gdp-mannose 4,6-dehydrataseCMN12_00615Not AvailablePositive111345 - 11246942000.9
gdp-fucose synthetaseCMN12_00620Not AvailablePositive112474 - 11344235657.9
mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomeraseCMN12_00625Not AvailablePositive113497 - 11491850297.3
bioy family transporterCMN12_00630Not AvailableNegative114994 - 11553918248.4
cobyric acid synthase cobqCMN12_00635Not AvailableNegative115635 - 11709551039.9

Displaying genes 221 – 230 of 7505 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.